RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CUL9Q8IWT3 2517 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 MYCNOSP40205 109 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 HILS1P60008 231 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 REG3AQ06141 175 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 NUPR1O60356 82 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 UBE2D3P61077 147 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 TEX49A0A1B0GTD5 131 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 DOPEY1Q5JWR5 2465 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 FXYD2P54710 66 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 C3orf22Q8N5N4 141 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
CLN8-201ENST00000331222 ACACBO00763 2458 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 TRBV6-1A0A0K0K1D8 114 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 C3orf84H3BNL1 204 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 RNF152Q8N8N0 203 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 C9orf85Q96MD7 179 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 PRM2P04554 102 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 PATE2Q6UY27 113 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 TOMM6Q96B49 74 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 CACNA1AO00555 2505 aa8.04□□□□□ -1.12
CLN8-201ENST00000331222 PTH2Q96A98 100 aa8.03□□□□□ -1.12
CLN8-201ENST00000331222 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
CLN8-201ENST00000331222 H0YGX0 51 aa8.03□□□□□ -1.12
CLN8-201ENST00000331222 PROK1P58294 105 aa8.03□□□□□ -1.12
CLN8-201ENST00000331222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
CLN8-201ENST00000331222 USP17L23D6RBM5 183 aa8.02□□□□□ -1.12
CLN8-201ENST00000331222 IGF1P05019 195 aa8.02□□□□□ -1.12
CLN8-201ENST00000331222 IGF2-ASQ6U949 168 aa8.02□□□□□ -1.12
CLN8-201ENST00000331222 C10orf99Q6UWK7 81 aa8.02□□□□□ -1.12
CLN8-201ENST00000331222 SDIM1Q6ZPB5 146 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 WFDC10AQ9H1F0 79 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 SIVA1O15304 175 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 C1orf158Q8N1D5 194 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 LINC00467Q9BRT7 94 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 LY6G6DO95868 133 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 NDUFA11Q86Y39 141 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 NCOR1P1Q9H4R4 102 aa8.02□□□□□ -1.13
CLN8-201ENST00000331222 HIVEP3Q5T1R4 2406 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 BPY2O14599 106 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 A0A0U1RQV1 116 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 CHCHD10Q8WYQ3 142 aaPredicted RBP8.01□□□□□ -1.13
CLN8-201ENST00000331222 X6R8D5 127 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 FRMD6-AS1P0C7T7 363 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 C18orf65Q6ZTR6 163 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
CLN8-201ENST00000331222 NDUFC2O95298 119 aa8□□□□□ -1.13
CLN8-201ENST00000331222 C14orf177Q52M58 125 aa8□□□□□ -1.13
CLN8-201ENST00000331222 IL17DQ8TAD2 202 aa8□□□□□ -1.13
CLN8-201ENST00000331222 SMR3AQ99954 134 aa8□□□□□ -1.13
CLN8-201ENST00000331222 C22orf34Q6ZV56 151 aa8□□□□□ -1.13
CLN8-201ENST00000331222 ZFAND2AQ8N6M9 145 aa8□□□□□ -1.13
CLN8-201ENST00000331222 HIVEP2P31629 2446 aa8□□□□□ -1.13
CLN8-201ENST00000331222 LENEPQ9Y5L5 61 aa8□□□□□ -1.13
CLN8-201ENST00000331222 A0A1W2PNU3 283 aaPredicted RBP8□□□□□ -1.13
CLN8-201ENST00000331222 PIK3CD-AS1Q5SR53 167 aa8□□□□□ -1.13
CLN8-201ENST00000331222 TRBV10-1A0A0K0K1A3 114 aa8□□□□□ -1.13
CLN8-201ENST00000331222 GDF5OSQ5U4N7 250 aa7.99□□□□□ -1.13
CLN8-201ENST00000331222 ABCA2Q9BZC7 2435 aa7.99□□□□□ -1.13
CLN8-201ENST00000331222 C5orf42Q9H799 3197 aa7.99□□□□□ -1.13
CLN8-201ENST00000331222 IGHV1-58A0A0C4DH39 117 aa7.99□□□□□ -1.13
CLN8-201ENST00000331222 PRR4Q16378 134 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 ATOX1O00244 68 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 ODF3L1Q8IXM7 274 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 C20orf173Q96LM9 149 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 PTPRBP23467 1997 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 ZNF843Q8N446 348 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 COL4A4P53420 1690 aaPredicted RBP7.98□□□□□ -1.13
CLN8-201ENST00000331222 LOC100131303A0A0U1RQF7 123 aa7.98□□□□□ -1.13
CLN8-201ENST00000331222 NANOS2P60321 138 aaKnown RBP7.97□□□□□ -1.13
CLN8-201ENST00000331222 A0A0J9YX75 114 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 IGLV3-1P01715 115 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 LRP4O75096 1905 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 A6NDX4 124 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 Q8NA96 180 aa7.97□□□□□ -1.13
CLN8-201ENST00000331222 PTPRSQ13332 1948 aa7.96□□□□□ -1.13
CLN8-201ENST00000331222 CXCL5P42830 114 aa7.96□□□□□ -1.13
CLN8-201ENST00000331222 Q8N976 141 aa7.96□□□□□ -1.13
CLN8-201ENST00000331222 FAM167A-AS1Q96KT0 104 aa7.96□□□□□ -1.13
CLN8-201ENST00000331222 IGLV2-8P01709 118 aa7.96□□□□□ -1.13
CLN8-201ENST00000331222 CLUHP3Q96NS8 147 aa7.96□□□□□ -1.13
CLN8-201ENST00000331222 BBC3Q96PG8 261 aaPredicted RBP7.96□□□□□ -1.14
CLN8-201ENST00000331222 JMJD7-PLA2G4BH0Y9G9 81 aa7.96□□□□□ -1.14
CLN8-201ENST00000331222 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.14
CLN8-201ENST00000331222 LOXL1Q08397 574 aaPredicted RBP7.96□□□□□ -1.14
CLN8-201ENST00000331222 CCDC168Q8NDH2 2452 aa7.95□□□□□ -1.14
CLN8-201ENST00000331222 CPAMD8Q8IZJ3 1885 aa7.95□□□□□ -1.14
CLN8-201ENST00000331222 PRORYQ9H606 182 aa7.95□□□□□ -1.14
CLN8-201ENST00000331222 E9PLD3 99 aa7.95□□□□□ -1.14
CLN8-201ENST00000331222 CIRBP-AS1Q8TBR5 109 aa7.95□□□□□ -1.14
CLN8-201ENST00000331222 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms