RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TRAV10A0A0B4J240 114 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 CFAP126Q5VTH2 177 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 LINC00322Q6ZN03 302 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-201ENST00000328300 G3V4G9 280 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 CLUHP3Q96NS8 147 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 A0A0J9YXY3 114 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 hADV29S1A0JD25 119 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 FAM236AA0A1B0GUQ0 79 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 FAM236BA0A1B0GV22 79 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 DEFB1P60022 68 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 SPTAN1Q13813 2472 aaKnown RBP8.5□□□□□ -1.05
COL4A5-201ENST00000328300 J3KT08 172 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.5□□□□□ -1.058e-7■■■■■ 35.9
COL4A5-201ENST00000328300 FAM208BQ5VWN6 2430 aa8.5□□□□□ -1.05
COL4A5-201ENST00000328300 KLK12Q9UKR0 248 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 PTPRQQ9UMZ3 2332 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 ARFGEF3Q5TH69 2177 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 A0A1B0GX51 115 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 M0QY20 66 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 NEXN-AS1Q8NBZ9 246 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 FUSP35637 526 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL4A5-201ENST00000328300 FAM110AQ9BQ89 295 aa8.49□□□□□ -1.05
COL4A5-201ENST00000328300 MUC7Q8TAX7 377 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 DCANP1Q8TF63 244 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 TTTY13Q9BZ97 58 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 TP53TG3Q9ULZ0 132 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 IGLV10-54A0A075B6I4 117 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 PDE6GP18545 87 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 REG3AQ06141 175 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 CNFNQ9BYD5 112 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 DEFB131BA0A096LNP1 70 aa8.48□□□□□ -1.05
COL4A5-201ENST00000328300 IGKV3D-7A0A0C4DH55 119 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 NDUFC2O95298 119 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 MIAQ16674 131 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 Q6ZUT4 128 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 HIVEP2P31629 2446 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 TRBV6-8A0A0A6YYG3 113 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
COL4A5-201ENST00000328300 CRIP1P50238 77 aa8.46□□□□□ -1.05
COL4A5-201ENST00000328300 ACACBO00763 2458 aa8.46□□□□□ -1.05
COL4A5-201ENST00000328300 DSCAMO60469 2012 aa8.46□□□□□ -1.05
COL4A5-201ENST00000328300 COX8CQ7Z4L0 72 aa8.46□□□□□ -1.06
COL4A5-201ENST00000328300 H3BT86 120 aa8.46□□□□□ -1.06
COL4A5-201ENST00000328300 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
COL4A5-201ENST00000328300 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 AVPP01185 164 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-201ENST00000328300 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-201ENST00000328300 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
COL4A5-201ENST00000328300 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 IBA57-AS1B1ANH7 110 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 GDF5OSQ5U4N7 250 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 C10orf99Q6UWK7 81 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 CREBBPQ92793 2442 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 DEFB4AO15263 64 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 PLCE1Q9P212 2302 aa8.45□□□□□ -1.06
COL4A5-201ENST00000328300 PCNX3Q9H6A9 2034 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 PTH2Q96A98 100 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 FRMD6-AS1P0C7T7 363 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 ESM1Q9NQ30 184 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 TIMM17BO60830 172 aa8.44□□□□□ -1.06
COL4A5-201ENST00000328300 ATG2AQ2TAZ0 1938 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 IGLV4-3A0A075B6K6 122 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 IGLV1-51P01701 117 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
COL4A5-201ENST00000328300 RNASE3P12724 160 aaKnown RBP8.43□□□□□ -1.06
COL4A5-201ENST00000328300 LELP1Q5T871 98 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 CUL9Q8IWT3 2517 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 MIR7-3HGQ8N6C7 128 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
COL4A5-201ENST00000328300 CRYGDP07320 174 aa8.42□□□□□ -1.06
COL4A5-201ENST00000328300 UBE2AP49459 152 aa8.42□□□□□ -1.06
COL4A5-201ENST00000328300 DEFB105AQ8NG35 78 aa8.42□□□□□ -1.06
COL4A5-201ENST00000328300 CPAMD8Q8IZJ3 1885 aa8.42□□□□□ -1.06
COL4A5-201ENST00000328300 A0A1W2PPR1 153 aa8.42□□□□□ -1.06
COL4A5-201ENST00000328300 LINC00269Q8N2A0 174 aa8.42□□□□□ -1.06
COL4A5-201ENST00000328300 ADAMTS20P59510 1910 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 Q8N2B8 174 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 RNF183Q96D59 192 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 TMEM256-PLSCR3K7ERE1 68 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-201ENST00000328300 KRTAP10-9P60411 292 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 DAND5Q8N907 189 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
COL4A5-201ENST00000328300 NDUFS5O43920 106 aa8.4□□□□□ -1.06
COL4A5-201ENST00000328300 COX7BP24311 80 aa8.4□□□□□ -1.06
COL4A5-201ENST00000328300 EXPH5Q8NEV8 1989 aa8.4□□□□□ -1.07
COL4A5-201ENST00000328300 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.07
COL4A5-201ENST00000328300 NRACQ8N912 160 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms