RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 IGHV3-30P01768 117 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 IGHV3-30-5P0DP03 117 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 UBE2D1P51668 147 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 TMEM61Q8N0U2 210 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 VPREB3Q9UKI3 123 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 IGLV4-3A0A075B6K6 122 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 RHOHQ15669 191 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 CFAP126Q5VTH2 177 aa9.51□□□□□ -0.89
HMGCS1-201ENST00000325110 NXPH4O95158 308 aa9.5□□□□□ -0.89
HMGCS1-201ENST00000325110 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
HMGCS1-201ENST00000325110 A0A1B0GV72 72 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 LEPROTO15243 131 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 SLC25A20O43772 301 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 NFE4Q86UQ8 179 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 ANKRD29Q8N6D5 301 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 FBN2P35556 2912 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 MXRA5Q9NR99 2828 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 TRGV1A0A0A0MS02 117 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 CKS1BP61024 79 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 PPDPFLQ8WWR9 84 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 PRO0461Q9UI25 63 aa9.49□□□□□ -0.89
HMGCS1-201ENST00000325110 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 GATA3P23771 443 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 CFHR3Q02985 330 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 NF1P21359 2839 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 ELANEP08246 267 aa9.48□□□□□ -0.89
HMGCS1-201ENST00000325110 TRBV20-1A0A075B6N2 111 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 LINC01619G3V211 115 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 MT-ATP8P03928 68 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 NSUN5P1Q3KNT7 163 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 Q6ZSV7 163 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 Q6ZUT4 128 aa9.47□□□□□ -0.89
HMGCS1-201ENST00000325110 A0A0J9YXY3 114 aa9.46□□□□□ -0.89
HMGCS1-201ENST00000325110 M0R2P5 195 aa9.46□□□□□ -0.9
HMGCS1-201ENST00000325110 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
HMGCS1-201ENST00000325110 PEMTQ9UBM1 199 aa9.46□□□□□ -0.9
HMGCS1-201ENST00000325110 DSCR9P59020 149 aa9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 MEIG1Q5JSS6 88 aa9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 H3BMM0 161 aa9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 STHQ8IWL8 128 aa9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 COX6CP09669 75 aa9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 Q6ZSN1 163 aa9.45□□□□□ -0.9
HMGCS1-201ENST00000325110 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
HMGCS1-201ENST00000325110 UBE2D3P61077 147 aa9.44□□□□□ -0.9
HMGCS1-201ENST00000325110 UBE2D2P62837 147 aa9.44□□□□□ -0.9
HMGCS1-201ENST00000325110 LINC00467Q9BRT7 94 aa9.44□□□□□ -0.9
HMGCS1-201ENST00000325110 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-201ENST00000325110 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
HMGCS1-201ENST00000325110 INSP01308 110 aa9.43□□□□□ -0.9
HMGCS1-201ENST00000325110 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
HMGCS1-201ENST00000325110 SPATA25Q9BR10 227 aa9.43□□□□□ -0.9
HMGCS1-201ENST00000325110 KRTAP10-9P60411 292 aa9.43□□□□□ -0.9
HMGCS1-201ENST00000325110 Q96MF0 132 aa9.43□□□□□ -0.9
HMGCS1-201ENST00000325110 TOMM7Q9P0U1 55 aa9.43□□□□□ -0.9
HMGCS1-201ENST00000325110 RBMY1BA6NDE4 496 aaKnown RBP9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 RBMY1EA6NEQ0 496 aaKnown RBP9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 BRI3O95415 125 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 RBMY1DP0C7P1 496 aaKnown RBP9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 XGP55808 180 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 GAGE4Q13068 117 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 GAGE5Q13069 117 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 ATXN8Q156A1 80 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 C2orf82Q6UX34 121 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 CLEC2BQ92478 149 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 CDKN2A-AS1Q9UH64 79 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 MAP6D1Q9H9H5 199 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
HMGCS1-201ENST00000325110 NDUFA7O95182 113 aa9.41□□□□□ -0.9
HMGCS1-201ENST00000325110 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-201ENST00000325110 IGHV1-58A0A0C4DH39 117 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 AMELXQ99217 191 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 TRIAP1O43715 76 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 SNCGO76070 127 aa9.4□□□□□ -0.9
HMGCS1-201ENST00000325110 TEX49A0A1B0GTD5 131 aa9.4□□□□□ -0.91
HMGCS1-201ENST00000325110 TMEM263Q8WUH6 116 aaKnown RBP9.4□□□□□ -0.91
HMGCS1-201ENST00000325110 Q9H8V8 135 aa9.4□□□□□ -0.91
HMGCS1-201ENST00000325110 J3QLI3 93 aa9.39□□□□□ -0.91
HMGCS1-201ENST00000325110 Q6YL49 198 aa9.39□□□□□ -0.91
HMGCS1-201ENST00000325110 UBE2L6O14933 153 aa9.39□□□□□ -0.91
HMGCS1-201ENST00000325110 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
HMGCS1-201ENST00000325110 TEX29Q8N6K0 151 aa9.39□□□□□ -0.91
HMGCS1-201ENST00000325110 IGHV4-31P0DP07 118 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms