RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 IGKV2-29A2NJV5 120 aaPredicted RBP5.17□□□□□ -1.58
RGPD3-201ENST00000304514 IGHV3-30-3P0DP02 117 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 SPTBN1Q01082 2364 aaKnown RBP5.17□□□□□ -1.58
RGPD3-201ENST00000304514 IGHV1-58A0A0C4DH39 117 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 GAGE13Q4V321 117 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 Q6ZUT4 128 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 PKD1L2Q7Z442 2459 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 CCL24O00175 119 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 TCL1BO95988 128 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 SRSF9Q13242 221 aaKnown RBP eCLIP5.17□□□□□ -1.58
RGPD3-201ENST00000304514 TEX29Q8N6K0 151 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 SPATA25Q9BR10 227 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 FLNCQ14315 2725 aa5.17□□□□□ -1.58
RGPD3-201ENST00000304514 IGHV3-64A0A075B6Q5 118 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 SCGB2A2Q13296 93 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 RNASE13Q5GAN3 156 aaKnown RBP5.16□□□□□ -1.58
RGPD3-201ENST00000304514 AGRNO00468 2067 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 VSIG2Q96IQ7 327 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.16□□□□□ -1.58
RGPD3-201ENST00000304514 CSNK1G2-AS1Q8NCQ2 148 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 TIMM21Q9BVV7 248 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 C1QTNF4Q9BXJ3 329 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 TSSC4Q9Y5U2 329 aaPredicted RBP5.16□□□□□ -1.58
RGPD3-201ENST00000304514 TENM4Q6N022 2769 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 COX6A2Q02221 97 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 CITED2Q99967 270 aaPredicted RBP5.16□□□□□ -1.58
RGPD3-201ENST00000304514 K7EQD1 137 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 M0QXV9 152 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 PSMB2P49721 201 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
RGPD3-201ENST00000304514 TRAV4A0A0B4J268 109 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 IGHV3-38A0A0C4DH36 116 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 STHQ8IWL8 128 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 ABCA1O95477 2261 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 A0A1W2PRX2 142 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 LINC00694P0DN24 101 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 KHDC1LQ5JSQ8 128 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 HIST2H2BCQ6DN03 193 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.58
RGPD3-201ENST00000304514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.15□□□□□ -1.58
RGPD3-201ENST00000304514 TRAV8-3A0A0A6YYJ7 113 aa5.15□□□□□ -1.59
RGPD3-201ENST00000304514 LINC01600Q96MT4 127 aa5.15□□□□□ -1.59
RGPD3-201ENST00000304514 XCL2Q9UBD3 114 aa5.15□□□□□ -1.59
RGPD3-201ENST00000304514 DOPEY1Q5JWR5 2465 aa5.15□□□□□ -1.59
RGPD3-201ENST00000304514 SPINK8P0C7L1 97 aa5.15□□□□□ -1.59
RGPD3-201ENST00000304514 TIRAPP58753 221 aa5.15□□□□□ -1.59
RGPD3-201ENST00000304514 A4D1N5 150 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 KRTAP10-3P60369 221 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 RPL24P83731 157 aaKnown RBP5.14□□□□□ -1.59
RGPD3-201ENST00000304514 LINC01006Q8NI28 216 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 FAM110AQ9BQ89 295 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 DAZ2Q13117 558 aaKnown RBP5.14□□□□□ -1.59
RGPD3-201ENST00000304514 NTM-AS1Q6ZSK4 140 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 MTURNQ8N3F0 131 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 A8MZ25 164 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 INSL3P51460 131 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 WNK2Q9Y3S1 2297 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 IGHV3-33P01772 117 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 ZFAND6Q6FIF0 208 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 GTSF1LQ9H1H1 148 aa5.14□□□□□ -1.59
RGPD3-201ENST00000304514 IGLV5-39A0A0G2JS06 123 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 TIMM17BO60830 172 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 APOMO95445 188 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 MIAQ16674 131 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 CSDC2Q9Y534 153 aaKnown RBP5.13□□□□□ -1.59
RGPD3-201ENST00000304514 NDUFA1O15239 70 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 IGLV1-51P01701 117 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 RNF183Q96D59 192 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 CARD19Q96LW7 228 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 SPTBN4Q9H254 2564 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 COL6A6A6NMZ7 2263 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 CACNA1BQ00975 2339 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 Q6ZTI0 123 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 TMEM101Q96IK0 257 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 OVOL2Q9BRP0 275 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 IGHV3OR16-12A0A075B7B8 117 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 PLA2G2AP14555 144 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 FOXI1Q12951 378 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 ZANQ9Y493 2812 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 USP24Q9UPU5 2620 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 F5H768 121 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 NDUFA7O95182 113 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 DAZ4Q86SG3 579 aaKnown RBP5.13□□□□□ -1.59
RGPD3-201ENST00000304514 C16orf74Q96GX8 76 aa5.13□□□□□ -1.59
RGPD3-201ENST00000304514 DAZ3Q9NR90 486 aaKnown RBP5.13□□□□□ -1.59
RGPD3-201ENST00000304514 COTL1Q14019 142 aa5.12□□□□□ -1.59
RGPD3-201ENST00000304514 TRBV20-1A0A075B6N2 111 aa5.12□□□□□ -1.59
RGPD3-201ENST00000304514 C11orf44Q8N8P7 122 aa5.12□□□□□ -1.59
RGPD3-201ENST00000304514 WFDC10AQ9H1F0 79 aa5.12□□□□□ -1.59
RGPD3-201ENST00000304514 TRGV1A0A0A0MS02 117 aa5.12□□□□□ -1.59
RGPD3-201ENST00000304514 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.12□□□□□ -1.59
RGPD3-201ENST00000304514 TRBV10-1A0A0K0K1A3 114 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 TRBV30A0A0K0K1B3 111 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 LINC00242Q5T6M2 205 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
RGPD3-201ENST00000304514 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms