RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
SEC16A-202ENST00000290037 TMEM61Q8N0U2 210 aa11.22□□□□□ -0.61
SEC16A-202ENST00000290037 ZFAND2AQ8N6M9 145 aa11.22□□□□□ -0.61
SEC16A-202ENST00000290037 MRPL55Q7Z7F7 128 aaKnown RBP11.22□□□□□ -0.61
SEC16A-202ENST00000290037 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
SEC16A-202ENST00000290037 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
SEC16A-202ENST00000290037 SEM1Q6ZVN7 128 aa11.21□□□□□ -0.61
SEC16A-202ENST00000290037 LINC01561Q8N1V8 128 aa11.21□□□□□ -0.61
SEC16A-202ENST00000290037 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.62
SEC16A-202ENST00000290037 Q6YL49 198 aa11.21□□□□□ -0.62
SEC16A-202ENST00000290037 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
SEC16A-202ENST00000290037 FAM110AQ9BQ89 295 aa11.2□□□□□ -0.62
SEC16A-202ENST00000290037 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
SEC16A-202ENST00000290037 CRIP2P52943 208 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-202ENST00000290037 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
SEC16A-202ENST00000290037 PROP1O75360 226 aa11.2□□□□□ -0.62
SEC16A-202ENST00000290037 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
SEC16A-202ENST00000290037 NAV2Q8IVL1 2488 aa11.19□□□□□ -0.62
SEC16A-202ENST00000290037 TMEM223A0PJW6 202 aa11.19□□□□□ -0.62
SEC16A-202ENST00000290037 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
SEC16A-202ENST00000290037 NXPH4O95158 308 aa11.19□□□□□ -0.62
SEC16A-202ENST00000290037 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
SEC16A-202ENST00000290037 PSMG3-AS1Q96PY0 264 aa11.19□□□□□ -0.62
SEC16A-202ENST00000290037 PRR15LQ9BU68 103 aa11.18□□□□□ -0.62
SEC16A-202ENST00000290037 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
SEC16A-202ENST00000290037 PLA2G2EQ9NZK7 142 aa11.18□□□□□ -0.62
SEC16A-202ENST00000290037 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
SEC16A-202ENST00000290037 NDUFV3P56181 108 aaKnown RBP11.17□□□□□ -0.62
SEC16A-202ENST00000290037 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 SEC61GP60059 68 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 Q6ZUT4 128 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 Q8N6K4 173 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 CHKB-CPT1BH3BT56 60 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 KLLNB2CW77 178 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 SLURP1P55000 103 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 LMO4P61968 165 aa11.17□□□□□ -0.62
SEC16A-202ENST00000290037 IGHV4-38-2P0DP08 117 aa11.16□□□□□ -0.62
SEC16A-202ENST00000290037 RPL18AQ02543 176 aaKnown RBP11.16□□□□□ -0.62
SEC16A-202ENST00000290037 LINC00467Q9BRT7 94 aa11.16□□□□□ -0.62
SEC16A-202ENST00000290037 SPRY2O43597 315 aa11.16□□□□□ -0.62
SEC16A-202ENST00000290037 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
SEC16A-202ENST00000290037 UPK3BQ9BT76 320 aa11.15□□□□□ -0.62
SEC16A-202ENST00000290037 A0A1B0GW54 56 aa11.15□□□□□ -0.62
SEC16A-202ENST00000290037 RS1O15537 224 aa11.15□□□□□ -0.62
SEC16A-202ENST00000290037 M0QY20 66 aa11.15□□□□□ -0.63
SEC16A-202ENST00000290037 CFHR3Q02985 330 aa11.15□□□□□ -0.63
SEC16A-202ENST00000290037 NDUFC2-KCTD14E9PQ53 114 aa11.14□□□□□ -0.63
SEC16A-202ENST00000290037 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
SEC16A-202ENST00000290037 UBE2AP49459 152 aa11.14□□□□□ -0.63
SEC16A-202ENST00000290037 HIVEP3Q5T1R4 2406 aa11.14□□□□□ -0.63
SEC16A-202ENST00000290037 LECT2O14960 151 aa11.14□□□□□ -0.63
SEC16A-202ENST00000290037 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
SEC16A-202ENST00000290037 BPY2O14599 106 aa11.12□□□□□ -0.63
SEC16A-202ENST00000290037 C5orf38Q86SI9 138 aa11.12□□□□□ -0.63
SEC16A-202ENST00000290037 HILS1P60008 231 aa11.12□□□□□ -0.63
SEC16A-202ENST00000290037 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
SEC16A-202ENST00000290037 CD164L2Q6UWJ8 174 aa11.12□□□□□ -0.63
SEC16A-202ENST00000290037 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
SEC16A-202ENST00000290037 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 A0A0J9YY99 117 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 BLCAPP62952 87 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 DEFB114Q30KQ6 69 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 TCL1BO95988 128 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 C3orf22Q8N5N4 141 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
SEC16A-202ENST00000290037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.1□□□□□ -0.63
SEC16A-202ENST00000290037 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 LINC00308Q8TCZ7 52 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 CITED2Q99967 270 aaPredicted RBP11.1□□□□□ -0.63
SEC16A-202ENST00000290037 C2CD3Q4AC94 2353 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 B5MCH6 92 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 ABCA2Q9BZC7 2435 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 TRBV6-8A0A0A6YYG3 113 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
SEC16A-202ENST00000290037 RITA1Q96K30 269 aa11.1□□□□□ -0.63
SEC16A-202ENST00000290037 REG3AQ06141 175 aa11.09□□□□□ -0.63
SEC16A-202ENST00000290037 Q8NA96 180 aa11.09□□□□□ -0.63
SEC16A-202ENST00000290037 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
SEC16A-202ENST00000290037 NDUFA7O95182 113 aa11.09□□□□□ -0.63
SEC16A-202ENST00000290037 CFAP126Q5VTH2 177 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 IGLV2-11P01706 119 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 WFDC2Q14508 124 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 Q8IZM0 81 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 LST1O00453 97 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 CRIP3Q6Q6R5 217 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 NUPR1O60356 82 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
SEC16A-202ENST00000290037 GATA1P15976 413 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-202ENST00000290037 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-202ENST00000290037 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
SEC16A-202ENST00000290037 K7ERS5 55 aa11.07□□□□□ -0.64
SEC16A-202ENST00000290037 NRACQ8N912 160 aa11.07□□□□□ -0.64
SEC16A-202ENST00000290037 IGLV1-40P01703 118 aa11.07□□□□□ -0.64
SEC16A-202ENST00000290037 IGHV3-33P01772 117 aa11.07□□□□□ -0.64
SEC16A-202ENST00000290037 NDUFS5O43920 106 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms