RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 B3GALT5-AS1P59052 145 aa5.51□□□□□ -1.53
GPNMB-201ENST00000258733 UBL5Q9BZL1 73 aa5.51□□□□□ -1.53
GPNMB-201ENST00000258733 KIF25-AS1Q9Y6Z4 181 aa5.51□□□□□ -1.53
GPNMB-201ENST00000258733 C19orf54Q5BKX5 351 aa5.5□□□□□ -1.53
GPNMB-201ENST00000258733 TECTAO75443 2155 aa5.5□□□□□ -1.53
GPNMB-201ENST00000258733 CLPSP04118 112 aa5.5□□□□□ -1.53
GPNMB-201ENST00000258733 LOC100131303A0A0U1RQF7 123 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 NREPQ16612 68 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 REV3LO60673 3130 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 DNAH14Q0VDD8 3507 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 TSHBP01222 138 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 ASCC3Q8N3C0 2202 aaKnown RBP5.49□□□□□ -1.53
GPNMB-201ENST00000258733 IGHV3-64A0A075B6Q5 118 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 PINLYPA6NC86 204 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 PSCAO43653 123 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 ZNF833PQ6ZTB9 187 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 C19orf73Q9NVV2 129 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 SMAD5-AS1Q9Y6J3 95 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 CHD9Q3L8U1 2897 aa5.49□□□□□ -1.53
GPNMB-201ENST00000258733 TRAV21A0A0B4J279 112 aa5.48□□□□□ -1.53
GPNMB-201ENST00000258733 IGHV1-69DA0A0B4J2H0 117 aa5.48□□□□□ -1.53
GPNMB-201ENST00000258733 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
GPNMB-201ENST00000258733 PRR3P79522 188 aaKnown RBP5.48□□□□□ -1.53
GPNMB-201ENST00000258733 LINC01560Q8TB33 94 aa5.48□□□□□ -1.53
GPNMB-201ENST00000258733 ZNF625Q96I27 306 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-201ENST00000258733 IGLV3-9A0A075B6K5 115 aa5.48□□□□□ -1.53
GPNMB-201ENST00000258733 SUMO2P61956 95 aaKnown RBP5.48□□□□□ -1.53
GPNMB-201ENST00000258733 LINC00574Q9H8X3 128 aa5.48□□□□□ -1.53
GPNMB-201ENST00000258733 PTPRQQ9UMZ3 2332 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 IGHV1OR15-1A0A075B7D0 117 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 TRGV3P03979 118 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 CTSGP08311 255 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 ZNRF1Q8ND25 227 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 H0YGG7 62 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 NCR3O14931 201 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 LY6HO94772 140 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 REG3AQ06141 175 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
GPNMB-201ENST00000258733 SPANXN1Q5VSR9 72 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 CYP4F30PQ9H0H9 118 aa5.47□□□□□ -1.53
GPNMB-201ENST00000258733 IGKV1D-37A0A075B6S9 117 aa5.46□□□□□ -1.53
GPNMB-201ENST00000258733 IGHV6-1A0A0B4J1U7 121 aa5.46□□□□□ -1.53
GPNMB-201ENST00000258733 Q8N3U1 123 aa5.46□□□□□ -1.53
GPNMB-201ENST00000258733 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.53
GPNMB-201ENST00000258733 SORL1Q92673 2214 aa5.46□□□□□ -1.54
GPNMB-201ENST00000258733 PRCDQ00LT1 54 aa5.46□□□□□ -1.54
GPNMB-201ENST00000258733 C9orf116Q5BN46 136 aaPredicted RBP5.46□□□□□ -1.54
GPNMB-201ENST00000258733 USP34Q70CQ2 3546 aa5.46□□□□□ -1.54
GPNMB-201ENST00000258733 TRBV6-8A0A0A6YYG3 113 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 A6NED7 52 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 MOBPQ13875 183 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 F5P12259 2224 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 CCL4L1Q8NHW4 92 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 FGF23Q9GZV9 251 aaPredicted RBP5.45□□□□□ -1.54
GPNMB-201ENST00000258733 FAM30AQ9NZY2 134 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 ATRXP46100 2492 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 SPTBN4Q9H254 2564 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 MUC3AQ02505 3323 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 LYPD1Q8N2G4 141 aa5.45□□□□□ -1.54
GPNMB-201ENST00000258733 TRANK1O15050 2925 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 C3orf84H3BNL1 204 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 IGHV3-30-3P0DP02 117 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 ZNF843Q8N446 348 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 LIMD2Q9BT23 127 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 MRPL36Q9P0J6 103 aaKnown RBP5.44□□□□□ -1.54
GPNMB-201ENST00000258733 CHD6Q8TD26 2715 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 EYSQ5T1H1 3165 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 C10orf128Q5T292 105 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 MIR7-3HGQ8N6C7 128 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 ZNF580Q9UK33 172 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 FAM208BQ5VWN6 2430 aa5.44□□□□□ -1.54
GPNMB-201ENST00000258733 IGKV3D-11A0A0A0MRZ8 115 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 IGHV3OR16-9A0A0B4J2B5 98 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 B4DSR2 109 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 C19orf84I3L1E1 186 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 PROP1O75360 226 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 NANOS2P60321 138 aaKnown RBP5.43□□□□□ -1.54
GPNMB-201ENST00000258733 BSPH1Q075Z2 132 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 MALRD1Q5VYJ5 2156 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 IGKV3-11P04433 115 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
GPNMB-201ENST00000258733 SCXQ7RTU7 201 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 TMEM105Q8N8V8 129 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
GPNMB-201ENST00000258733 USP24Q9UPU5 2620 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 Q75L30 129 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 CELA1Q9UNI1 258 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 KNL1Q8NG31 2342 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 DEFB108AA8MXU0 73 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 SAA1P0DJI8 122 aaPredicted RBP5.42□□□□□ -1.54
GPNMB-201ENST00000258733 RETNLBQ9BQ08 111 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 CHD8Q9HCK8 2581 aa5.42□□□□□ -1.54
GPNMB-201ENST00000258733 IGHV3-43A0A0B4J1X8 118 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 PATE4P0C8F1 98 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 IGHV3-43DP0DP04 118 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 BPY2O14599 106 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 MRPS21P82921 87 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms