RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ZNF22P17026 224 aaPredicted RBP14.89□□□□□ -0.03
SOX4-201ENST00000244745 XGP55808 180 aa14.89□□□□□ -0.03
SOX4-201ENST00000244745 ABCA1O95477 2261 aa14.89□□□□□ -0.03
SOX4-201ENST00000244745 ODF3Q96PU9 254 aa14.89□□□□□ -0.03
SOX4-201ENST00000244745 TRBV30A0A0K0K1B3 111 aa14.89□□□□□ -0.03
SOX4-201ENST00000244745 C19orf84I3L1E1 186 aa14.89□□□□□ -0.03
SOX4-201ENST00000244745 NDUFS5O43920 106 aa14.88□□□□□ -0.03
SOX4-201ENST00000244745 IGLV4-3A0A075B6K6 122 aa14.88□□□□□ -0.03
SOX4-201ENST00000244745 ETDCA0A1B0GVM5 59 aa14.88□□□□□ -0.03
SOX4-201ENST00000244745 HIST2H2BDQ6DRA6 164 aa14.88□□□□□ -0.03
SOX4-201ENST00000244745 ZFAND2AQ8N6M9 145 aa14.87□□□□□ -0.03
SOX4-201ENST00000244745 TNFRSF13BO14836 293 aaPredicted RBP14.87□□□□□ -0.03
SOX4-201ENST00000244745 EBI3Q14213 229 aa14.86□□□□□ -0.03
SOX4-201ENST00000244745 Q6ZTI0 123 aa14.86□□□□□ -0.03
SOX4-201ENST00000244745 LRP4O75096 1905 aa14.85□□□□□ -0.03
SOX4-201ENST00000244745 GAS8-AS1O95177 125 aa14.85□□□□□ -0.03
SOX4-201ENST00000244745 DEFB135Q30KP9 77 aa14.85□□□□□ -0.03
SOX4-201ENST00000244745 NRACQ8N912 160 aa14.85□□□□□ -0.03
SOX4-201ENST00000244745 K7EQG2 157 aa14.85□□□□□ -0.03
SOX4-201ENST00000244745 UFSP1Q6NVU6 142 aa14.85□□□□□ -0.03
SOX4-201ENST00000244745 FSTL3O95633 263 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 NDUFA1O15239 70 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 SPAG11BQ08648 103 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 C20orf197Q8N268 126 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 URB1-AS1Q96HZ7 61 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 FAM236DA0A1B0GTK5 79 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 FAM236CP0DP71 79 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 CDKN2A-AS1Q9UH64 79 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 PTPRSQ13332 1948 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 M0QY20 66 aa14.84□□□□□ -0.03
SOX4-201ENST00000244745 TRBV10-1A0A0K0K1A3 114 aa14.83□□□□□ -0.03
SOX4-201ENST00000244745 PROK1P58294 105 aa14.83□□□□□ -0.03
SOX4-201ENST00000244745 PRR9Q5T870 116 aa14.83□□□□□ -0.03
SOX4-201ENST00000244745 C11orf21Q9P2W6 132 aa14.83□□□□□ -0.03
SOX4-201ENST00000244745 CXCL5P42830 114 aa14.83□□□□□ -0.04
SOX4-201ENST00000244745 C10orf142B7Z368 130 aa14.82□□□□□ -0.04
SOX4-201ENST00000244745 NDUFA7O95182 113 aa14.82□□□□□ -0.04
SOX4-201ENST00000244745 DIRC1Q969H9 104 aa14.82□□□□□ -0.04
SOX4-201ENST00000244745 MP68P56378 58 aa14.81□□□□□ -0.04
SOX4-201ENST00000244745 KLK12Q9UKR0 248 aa14.81□□□□□ -0.04
SOX4-201ENST00000244745 LINC00308Q8TCZ7 52 aa14.81□□□□□ -0.04
SOX4-201ENST00000244745 CACNA1HO95180 2353 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 DNAJC9-AS1A6NH13 148 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 SLPIP03973 132 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 C11orf71Q6IPW1 123 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 WFDC11Q8NEX6 87 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 TANC2Q9HCD6 1990 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 C10orf99Q6UWK7 81 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 NBASA2RRP1 2371 aa14.8□□□□□ -0.04
SOX4-201ENST00000244745 HCFC1P51610 2035 aa14.79□□□□□ -0.04
SOX4-201ENST00000244745 ENHOQ6UWT2 76 aa14.79□□□□□ -0.04
SOX4-201ENST00000244745 EP400Q96L91 3159 aa14.79□□□□□ -0.04
SOX4-201ENST00000244745 MPLKIPQ8TAP9 179 aa14.79□□□□□ -0.04
SOX4-201ENST00000244745 TECTAO75443 2155 aa14.79□□□□□ -0.04
SOX4-201ENST00000244745 HIGD2BQ4VC39 106 aa14.78□□□□□ -0.04
SOX4-201ENST00000244745 ABCA4P78363 2273 aa14.78□□□□□ -0.04
SOX4-201ENST00000244745 TIRAPP58753 221 aa14.78□□□□□ -0.04
SOX4-201ENST00000244745 SPTAN1Q13813 2472 aaKnown RBP14.78□□□□□ -0.04
SOX4-201ENST00000244745 RNASE3P12724 160 aaKnown RBP14.77□□□□□ -0.04
SOX4-201ENST00000244745 Q6ZS46 218 aa14.77□□□□□ -0.04
SOX4-201ENST00000244745 Q8N6K4 173 aa14.77□□□□□ -0.04
SOX4-201ENST00000244745 A8MZ25 164 aa14.77□□□□□ -0.04
SOX4-201ENST00000244745 ZMAT4Q9H898 229 aa14.77□□□□□ -0.04
SOX4-201ENST00000244745 Q6YL49 198 aa14.77□□□□□ -0.05
SOX4-201ENST00000244745 PIK3CD-AS1Q5SR53 167 aa14.76□□□□□ -0.05
SOX4-201ENST00000244745 PRO0255Q9UI72 69 aa14.76□□□□□ -0.05
SOX4-201ENST00000244745 F8W735 103 aaPredicted RBP14.76□□□□□ -0.05
SOX4-201ENST00000244745 MED13LQ71F56 2210 aa14.76□□□□□ -0.05
SOX4-201ENST00000244745 NACAE9PAV3 2078 aa14.75□□□□□ -0.05
SOX4-201ENST00000244745 TSHBP01222 138 aa14.75□□□□□ -0.05
SOX4-201ENST00000244745 DEFB114Q30KQ6 69 aa14.75□□□□□ -0.05
SOX4-201ENST00000244745 LINC00269Q8N2A0 174 aa14.75□□□□□ -0.05
SOX4-201ENST00000244745 PDE6GP18545 87 aa14.74□□□□□ -0.05
SOX4-201ENST00000244745 TRBV27A0A0K0K1C4 114 aa14.74□□□□□ -0.05
SOX4-201ENST00000244745 FAM110AQ9BQ89 295 aa14.74□□□□□ -0.05
SOX4-201ENST00000244745 ATP5EP2Q5VTU8 51 aa14.73□□□□□ -0.05
SOX4-201ENST00000244745 CPAMD8Q8IZJ3 1885 aa14.73□□□□□ -0.05
SOX4-201ENST00000244745 IGHV4-31P0DP07 118 aa14.72□□□□□ -0.05
SOX4-201ENST00000244745 COX7BP24311 80 aa14.72□□□□□ -0.05
SOX4-201ENST00000244745 IMUPQ9GZP8 106 aa14.72□□□□□ -0.05
SOX4-201ENST00000244745 CLPSL1A2RUU4 121 aa14.72□□□□□ -0.05
SOX4-201ENST00000244745 H7C423 109 aa14.72□□□□□ -0.05
SOX4-201ENST00000244745 LST1O00453 97 aa14.71□□□□□ -0.05
SOX4-201ENST00000244745 SCXQ7RTU7 201 aa14.71□□□□□ -0.05
SOX4-201ENST00000244745 PKIGQ9Y2B9 76 aa14.71□□□□□ -0.05
SOX4-201ENST00000244745 DOPEY2Q9Y3R5 2298 aa14.71□□□□□ -0.06
SOX4-201ENST00000244745 CCL18P55774 89 aa14.71□□□□□ -0.06
SOX4-201ENST00000244745 TRBV6-5A0A0K0K1A5 114 aa14.7□□□□□ -0.06
SOX4-201ENST00000244745 A0A0U1RQV1 116 aa14.7□□□□□ -0.06
SOX4-201ENST00000244745 REG3AQ06141 175 aa14.7□□□□□ -0.06
SOX4-201ENST00000244745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.7□□□□□ -0.06
SOX4-201ENST00000244745 NDUFC2-KCTD14E9PQ53 114 aa14.69□□□□□ -0.06
SOX4-201ENST00000244745 LINC00694P0DN24 101 aa14.69□□□□□ -0.06
SOX4-201ENST00000244745 SERP2Q8N6R1 65 aa14.69□□□□□ -0.06
SOX4-201ENST00000244745 PRORYQ9H606 182 aa14.69□□□□□ -0.06
SOX4-201ENST00000244745 COX7CP15954 63 aa14.68□□□□□ -0.06
SOX4-201ENST00000244745 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
SOX4-201ENST00000244745 CHCHD10Q8WYQ3 142 aaPredicted RBP14.67□□□□□ -0.06
SOX4-201ENST00000244745 PYGO1Q9Y3Y4 419 aa14.67□□□□□ -0.06
SOX4-201ENST00000244745 COL5A1P20908 1838 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms