RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 RNF185Q96GF1 192 aa5.38□□□□□ -1.55
CPS1-201ENST00000233072 TDRG1Q3Y452 100 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 A6NED7 52 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 ARID1AO14497 2285 aa5.37□□□□□ -1.55
CPS1-201ENST00000233072 COX7CP15954 63 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 Q6Q795 121 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 ZNF295-AS1Q8N0V1 137 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 CEMP1Q6PRD7 247 aaPredicted RBP5.36□□□□□ -1.55
CPS1-201ENST00000233072 KNTC1P50748 2209 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 DEFB1P60022 68 aa5.36□□□□□ -1.55
CPS1-201ENST00000233072 TSHBP01222 138 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 KLLNB2CW77 178 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 SDIM1Q6ZPB5 146 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 ZNF843Q8N446 348 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 ZNF580Q9UK33 172 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 UBE2D1P51668 147 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 CHCHD7Q9BUK0 85 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 HIGD2AQ9BW72 106 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 PRO3102Q9H379 93 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 A0A087WZ39 114 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 IGKV2-24A0A0C4DH68 120 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 PHF3Q92576 2039 aaKnown RBP5.35□□□□□ -1.55
CPS1-201ENST00000233072 IGKV2D-26A0A0A0MRZ7 120 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 UBE2D4Q9Y2X8 147 aa5.35□□□□□ -1.55
CPS1-201ENST00000233072 BRI3O95415 125 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 IGLV2-11P01706 119 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 C1orf229Q6ZS94 237 aaPredicted RBP5.34□□□□□ -1.55
CPS1-201ENST00000233072 HEATR5AQ86XA9 2040 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 ENHOQ6UWT2 76 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 Q6ZPA2 131 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 CLUHP3Q96NS8 147 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
CPS1-201ENST00000233072 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.55
CPS1-201ENST00000233072 Q8IZM0 81 aa5.34□□□□□ -1.55
CPS1-201ENST00000233072 FAM19A5Q7Z5A7 132 aaPredicted RBP5.34□□□□□ -1.56
CPS1-201ENST00000233072 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.56
CPS1-201ENST00000233072 WFDC11Q8NEX6 87 aa5.34□□□□□ -1.56
CPS1-201ENST00000233072 MYO7BQ6PIF6 2116 aa5.34□□□□□ -1.56
CPS1-201ENST00000233072 INAFM1C9JVW0 142 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 TRIAP1O43715 76 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 Q8N976 141 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 LY6G6DO95868 133 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 NRACQ8N912 160 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 CRIP1P50238 77 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 RP1P56715 2156 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 FRMD6-AS1P0C7T7 363 aa5.33□□□□□ -1.56
CPS1-201ENST00000233072 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.33□□□□□ -1.56
CPS1-201ENST00000233072 TEX49A0A1B0GTD5 131 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 Q6JHZ5 121 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 RETNQ9HD89 108 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 LINC00959A0A1B0GUT2 108 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 EML6Q6ZMW3 1958 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 NUPR2A6NF83 97 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 RBX1P62877 108 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 CNFNQ9BYD5 112 aa5.32□□□□□ -1.56
CPS1-201ENST00000233072 ASCC3Q8N3C0 2202 aaKnown RBP5.32□□□□□ -1.56
CPS1-201ENST00000233072 CABIN1Q9Y6J0 2220 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 SEC16AO15027 2179 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 RNASE3P12724 160 aaKnown RBP5.31□□□□□ -1.56
CPS1-201ENST00000233072 UBE2D3P61077 147 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 UBE2D2P62837 147 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 ALPK3Q96L96 1907 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 LST1O00453 97 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
CPS1-201ENST00000233072 C16orf95Q9H693 158 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 CNTRLQ7Z7A1 2325 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 NOTCH4Q99466 2003 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 HEATR1Q9H583 2144 aaKnown RBP5.31□□□□□ -1.56
CPS1-201ENST00000233072 VPREB1P12018 145 aa5.31□□□□□ -1.56
CPS1-201ENST00000233072 KPRPQ5T749 579 aaPredicted RBP5.3□□□□□ -1.56
CPS1-201ENST00000233072 Q8N9L7 120 aa5.3□□□□□ -1.56
CPS1-201ENST00000233072 LINC01561Q8N1V8 128 aa5.3□□□□□ -1.56
CPS1-201ENST00000233072 CCKP06307 115 aa5.3□□□□□ -1.56
CPS1-201ENST00000233072 POLR2KP53803 58 aaKnown RBP5.3□□□□□ -1.56
CPS1-201ENST00000233072 C6orf99Q4VX62 202 aa5.3□□□□□ -1.56
CPS1-201ENST00000233072 LINC01006Q8NI28 216 aa5.3□□□□□ -1.56
CPS1-201ENST00000233072 DCANP1Q8TF63 244 aa5.3□□□□□ -1.56
CPS1-201ENST00000233072 M0QXV9 152 aa5.29□□□□□ -1.56
CPS1-201ENST00000233072 DOCK8Q8NF50 2099 aa5.29□□□□□ -1.56
CPS1-201ENST00000233072 DYSFO75923 2080 aa5.29□□□□□ -1.56
CPS1-201ENST00000233072 TRAV7A0A075B6U4 112 aa5.29□□□□□ -1.56
CPS1-201ENST00000233072 PLAC8L1A1L4L8 177 aa5.29□□□□□ -1.56
CPS1-201ENST00000233072 ZNF73O43830 326 aaPredicted RBP5.29□□□□□ -1.56
CPS1-201ENST00000233072 MAPKAPK5-AS1Q8N8E1 139 aa5.29□□□□□ -1.56
CPS1-201ENST00000233072 COL5A1P20908 1838 aaPredicted RBP5.29□□□□□ -1.56
CPS1-201ENST00000233072 CCDC179H3BU77 68 aa5.28□□□□□ -1.56
CPS1-201ENST00000233072 WISP2O76076 250 aa5.28□□□□□ -1.56
CPS1-201ENST00000233072 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
CPS1-201ENST00000233072 LINC00694P0DN24 101 aa5.28□□□□□ -1.56
CPS1-201ENST00000233072 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms