RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Csrp1P97315 193 aaKnown RBP12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Q3UNZ8 350 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 C1qtnf9Q4ZJN1 333 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Q8BG31 207 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Cphx2Q8BX39 182 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 AsmtD3KU66 387 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 CrygsO35486 178 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Cacng7P62956 275 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Col9a1Q05722 921 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Hyls1Q9CXX0 307 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Fam168aQ8BGZ2 244 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Tac4Q99N14 128 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 4930544G11RikQ9CR99 193 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Zfpl1Q9DB43 310 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 PlnP61014 52 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Fbln7Q501P1 440 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ss18Q62280 418 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 AgaQ64191 346 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 AtraidQ6PGD0 223 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Hapln4Q80WM4 400 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Umad1E0CX23 159 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Olfr235E9Q9Z6 312 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ccl3P10855 92 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm4792Q569Q2 183 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Nrn1Q8CFV4 142 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Siglec12Q91Y57 467 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Megf10Q6DIB5 1147 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Morn2Q6UL01 79 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Q8VC23 124 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Zfp983E9PUT0 460 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 D930007J09RikQ9D2K6 131 aa12.31□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm29644A0A087WPG2 191 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ighv1-67A0A0G2JFN9 117 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 PpoxP51175 477 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Znf146Q8BQN6 292 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ralgapa2A3KGS3 1872 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Zfp977L7N2E7 438 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm20854Q62461 227 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 CenpvQ9CXS4 252 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Baz2aQ91YE5 1889 aaKnown RBP12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Nkx2-8O70584 235 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 F8Q06194 2319 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Tcrg-V4A0A0B4J1J8 138 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Klk7Q91VE3 249 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 GrhprQ91Z53 328 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Psmg3Q9CZH3 122 aa12.3□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm10073E9Q3T0 114 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 OpalinQ7M750 143 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Zfp420Q7TMN8 578 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Tex36Q9D5N9 219 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm9944Q8C559 102 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 H2-DMb2Q31099 261 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm12888Q3UW77 119 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 QrfpQ8CE23 124 aa12.29□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Cmc4Q61908 68 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Msrb2Q78J03 175 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Saxo2Q8BQB6 394 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ttc6G3UYY4 1857 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Tmem129Q8K304 362 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ighv1-20A0A0A6YX66 117 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Q8BTC1 67 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Znf319Q9ERR8 581 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm20458E9PXJ7 78 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Efnb3O35393 340 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Prima1Q810F0 153 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ly6g6eQ8K1T6 166 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ormdl2Q9CQZ0 153 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Prr23a3Q9CWP9 254 aa12.28□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 1700015F17RikD3YUK8 150 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Tnfrsf9P20334 256 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gsx1P31315 261 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Hspe1Q64433 102 aaKnown RBP12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Znf329Q6GQR8 522 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 MNCb-2875Q9DCB3 74 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Trav7-5A0A0G2JFX6 112 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gata2O09100 480 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 DdtO35215 118 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Dkk1O54908 272 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Sdr39u1Q5M8N4 308 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Znf260Q62513 407 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Poc1aQ8JZX3 405 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Znhit1Q8R331 154 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Spcs1Q9D958 161 aa12.27□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Srsf1Q6PDM2 248 aaKnown RBP12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Dock1Q8BUR4 1865 aa12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm36368A0A1D5RLK8 91 aa12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 H2al2bA9Z055 111 aa12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Smr2O09133 150 aa12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Olfr810Q8VFH9 312 aa12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Tmem219Q9D123 240 aa12.27□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Mmp23O88676 391 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 ApohQ01339 345 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 AgerQ62151 402 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 ChodlQ9CXM0 273 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Fbln5Q9WVH9 448 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Trbv19A0A0B4J1H4 117 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 GchfrP99025 84 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 D130052B06RikQ3UW13 202 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Oosp2Q4FZG8 168 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 C1ql4Q4ZJM9 238 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms