RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ifna12Q80SS5 189 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Scnm1Q8K136 229 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Lmo1Q924W9 156 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 SpegQ62407 3262 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Col4a2P08122 1707 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ighv7-4A0A0A6YXL5 121 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gnb4P29387 340 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ccl11P48298 97 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Xaf1Q5NBU8 273 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ube2d2bQ6ZWY6 147 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ccl8Q9Z121 97 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 BptfA2A654 3036 aaKnown RBP8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Col6a4A2AX52 2309 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav7-4A0A075B6C1 113 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1189A2AV11 306 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Sertad4A7DTG3 377 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm5129F6YHA9 99 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm27021M0QWE2 156 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cd59aO55186 123 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rpl27aP14115 148 aaKnown RBP7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Wnt5bP22726 359 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav7d-4Q5R1H9 113 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Q8C3M9 231 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1265Q8VEZ3 309 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 GgctQ9D7X8 188 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Mixl1Q9WUI0 231 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Zfp53Q9Z117 652 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Dmxl1Q6PNC0 3013 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rnf212bD3Z423 297 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm21775J3KMK6 180 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav6d-4Q5R1I0 115 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Vstm5Q9D806 199 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr961Q9EQ84 314 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gpa33Q9JKA5 319 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trbv19A0A0B4J1H4 117 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Znf385cA2A5E6 429 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Mettl23A2AA28 253 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Spint5J3KMK8 105 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Defb20Q30KP3 96 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm10842Q3U587 122 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Q6PIU9 354 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Dnd1Q6VY05 352 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Hnrnpa3Q8BG05 379 aaKnown RBP7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 TirapQ99JY1 241 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rnf115Q9D0C1 305 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Icam4Q9ERM2 262 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Dchs1E9PVD3 3291 aa7.99□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 SeboxP70368 190 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 F7P70375 446 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 MymxQ2Q5T5 84 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Q3U1D9 316 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr263Q7TQT8 317 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr411Q7TRW8 315 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Spink2Q8BMY7 86 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Vmn1r70Q8R254 298 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Wdr31Q9JHB4 367 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Npc2Q9Z0J0 149 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 G6pc2Q9Z186 355 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm37388A0A0A6YY46 143 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm13030A2APQ6 143 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm6034E9Q101 117 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm12169F2Z474 250 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm19684G3UZ45 117 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Fgfbp1O70514 251 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Hoxa6P09092 232 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Atp6v0cP63082 155 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Siah2Q06986 325 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 V1rd19Q3KNP5 305 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Pmis2Q497Q9 96 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ms4a13Q5FWC3 203 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Duxbl2Q7TNE6 350 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr965Q7TRA7 312 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Higd1bQ99JY6 98 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 MmdQ9CQY7 238 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 DysfQ9ESD7 2090 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ighv1-26A0A075B5V0 117 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav16A0A075B653 116 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1098A2AVB0 315 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cldn34c3J3QJW5 233 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cldn34c2J3QNM1 233 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ccl3P10855 92 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Nutf2P61971 127 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cd52Q64389 74 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Tnfsf18Q7TS55 173 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cldn34c1Q8K193 234 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm27027S4R1M6 97 aa7.98□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1179A2AUS6 307 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm20825J3QM67 227 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rab33bO35963 229 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 TfpiO54819 306 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 P01783 136 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 GchfrP99025 84 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ssty2Q149W4 227 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Pilrb2Q2YFS1 225 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cd96Q3U0X8 602 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm21394Q497R7 227 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm20854Q62461 227 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1535Q7TQU0 326 aa7.97□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Vps25Q9CQ80 176 aa7.97□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms