RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Lim2P56563 173 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 March3Q8BRX9 218 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Abhd14bQ8VCR7 210 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tcrg-V1P06325 135 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Pygo1Q9D0P5 417 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 2310009B15RikA0A0A6YWI4 143 aa7.27□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Bcl6bO88282 474 aa7.27□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ndufb6Q3UIU2 128 aa7.27□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Camk2n2Q78WH7 79 aa7.27□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01657 111 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 BlcapP62951 87 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Rusc2Q80U22 1514 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm15056F6ZR08 88 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Tmem178bM0QWJ9 172 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Vmn1r181Q0P547 304 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 KncnQ307W7 124 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Znrf2Q71FD5 238 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Cela1Q91X79 266 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm43517E9PYS1 339 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Cfc1P97766 202 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 BC049762Q8C601 163 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gemin7Q9CWY4 129 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gemin5Q8BX17 1502 aaKnown RBP7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Iqsec2Q5DU25 1478 aa7.27□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ighv1-66A0A075B5X5 117 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Tcrg-V7A0A0A6YYE8 116 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Cyb561d1A2AE42 229 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm9887F6RFI0 207 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Adcyap1O70176 175 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Rpp21Q8R040 150 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 SptssbQ925E8 76 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Abca9Q8K449 1623 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm14399A2ARW8 610 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 9830107B12RikD3Z5D6 160 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Rpl18P35980 188 aaKnown RBP7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Srd5a1Q68FF9 255 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ighv2-6A0A075B6A7 116 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Trav7-1A0A0G2JEV5 112 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm11011D3Z3L9 86 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Pitx3O35160 302 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm28557A0A087WQQ0 336 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Dus4lQ32M08 324 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ankrd37Q569N2 159 aa7.26□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Cr2P19070 1025 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Rpl18aP62717 176 aaKnown RBP7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Srp19Q9D7A6 144 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm10643Q3URG9 111 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Trdv4Q5R1A3 115 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 RfngO09009 332 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Aqp3Q8R2N1 292 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 9130008F23RikQ9D2Z6 181 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 MymxQ2Q5T5 84 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Olfr877Q8VF62 311 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Raet1eQ9CZQ6 251 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Try5Q9QUK9 246 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 P01790 122 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Efemp1Q8BPB5 493 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Prss8Q9ESD1 342 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 AlkP97793 1621 aa7.25□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Usp54Q8BL06 1588 aaKnown RBP7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Olfr1402Q8VET1 320 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Smim8Q9CQQ0 97 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Hcfc2Q9D968 241 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Fhl5Q9WTX7 284 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ighv1-12A0A0A6YXJ9 117 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 H2al2bA9Z055 111 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm6569D3YTM9 175 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm4744D3Z3S5 154 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Foxq1O70220 400 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ighv8-8A0A0A6YXQ0 119 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Tmem200bD3Z0P8 284 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Rnf11Q9QYK7 154 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Arhgef11Q68FM7 1552 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm12057A0A087WR21 115 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ifi27l2aQ8R412 90 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Tmem126aQ9D8Y1 196 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 HcstQ9QUJ0 79 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Fhl3Q9R059 289 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 4930407I10RikD3Z5T8 1512 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Slit1Q80TR4 1531 aa7.24□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Trav8-1A0A075B641 109 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 P01641 117 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Tmem255bQ5FW56 369 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm5468Q8C3D3 155 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Prr15lQ8JZM2 100 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Slc25a39Q9D8K8 359 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Reg3dQ9QUS9 175 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Trav12d-1A0N8R0 115 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Olfr491Q8VG06 310 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Kif14L0N7N1 1674 aaKnown RBP7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm45716A0A1B0GRQ0 93 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Klk15Q8CGR4 254 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Ighv1-55A0A075B5W6 117 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm20538F6Z9R1 75 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm8888J3QPX5 126 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Lst1O08843 95 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 BlvrbQ923D2 206 aaKnown RBP7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Tac4Q99N14 128 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Mrpl27Q99N92 148 aa7.23□□□□□ -1.25
Clcn3-202ENSMUST00000056508 Gm33815A0A087WNV3 176 aa7.23□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms