RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gm15093A2BI72 449 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Luzp4B1AV09 449 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15107B1B0X0 449 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15097E9QA14 449 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm9376G3UW68 176 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Ube2l3P68037 154 aaKnown RBP15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Ang4Q3TMQ6 144 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Arl14eplQ3UKZ7 152 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Trav6-2Q5R1I4 113 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15085Q62012 449 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Znf260Q62513 407 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr1320A2AHM8 319 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm21913J3KML9 361 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm21776J3QPJ5 361 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Lgals1P16045 135 aaKnown RBP15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Twist1P26687 206 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 ErhP84089 104 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Rpl19P84099 196 aaKnown RBP15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Trav6d-4Q5R1I0 115 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Vstm2aQ8R0A6 236 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr1323Q8VF35 309 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Atg101Q9D8Z6 218 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Vmn1r224E9PWK2 298 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Spint5J3KMK8 105 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 CebpgP53568 150 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 F7P70375 446 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Fbxl7Q5BJ29 491 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Fhl4Q8CDC8 279 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Rnf2Q9CQJ4 336 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Psmg3Q9CZH3 122 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Pard6aQ9Z101 346 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15217A2CG07 155 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm21060J3KMU4 56 aa15.16■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 CadB2RQC6 2225 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Slc35d1A2AKQ0 355 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Zcchc24B2RVL6 241 aaKnown RBP15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 PigyP0C1P0 71 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Rnase9P60154 184 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Znf48Q3US17 591 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Usf1Q61069 310 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr1535Q7TQU0 326 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Cisd1Q91WS0 108 aaKnown RBP15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Ap5s1Q9D742 170 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Icam4Q9ERM2 262 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 CcsQ9WU84 274 aa15.15■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Zfp825A0A1Y7VK00 292 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 KhkP97328 298 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ifna14Q810G3 189 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 P03980 138 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Khdc1bP0C7A0 126 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Pcgf2P23798 342 aaKnown RBP15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Rplp1P47955 114 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 H2-DMb2Q31099 261 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Jpt2Q6PGH2 190 aaKnown RBP15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr491Q8VG06 310 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ceacam11Q9D0Z8 303 aa15.14■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Trav4-4-dv10A0A075B651 110 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 P18525 117 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 P18529 117 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr266Q8VFC3 316 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Pam16Q9CQV1 125 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Oxld1Q9CR10 201 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Igkv14-130A0A0G2JF45 117 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Gm21900J3QP38 180 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Gm4791J3QQ14 102 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 P01759 136 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 P18526 117 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Bex6Q3TZW7 114 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Tas2r114Q7M722 309 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 PirtQ8BFY0 135 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Fam168aQ8BGZ2 244 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Dram1Q9DC58 238 aa15.13■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr1098A2AVB0 315 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ccl17F6R5P4 103 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Pmp2P24526 132 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Trav15-1-dv6-1Q5R1D2 117 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Duxbl2Q7TNE6 350 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 RelnQ60841 3461 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr466E9Q2B9 308 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 PpoxP51175 477 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr495Q8VF12 330 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Sh2d6Q9D413 297 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 CompQ9R0G6 755 aa15.12■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 A0A286YCQ8 80 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr262Q8VFV8 312 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr982Q8VGB3 321 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ppp1r14aQ91VC7 147 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Mogat1Q91ZV4 335 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Plxdc1Q91ZV7 500 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 TirapQ99JY1 241 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Zfp950A0A0U1RQ46 609 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Zfp930A0A1D5RM15 441 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Gm6904E9PVF1 202 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Tmem139E9PX92 214 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Slc25a17O70579 307 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Gata4Q08369 441 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Nrn1Q8CFV4 142 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Gatad1Q920S3 266 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ssbp3Q9D032 388 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Tmem126aQ9D8Y1 196 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 198.8 ms