RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
PHGDH-231ENST00000641939 CTRLP40313 264 aa10.07□□□□□ -0.8
PHGDH-231ENST00000641939 DAZ4Q86SG3 579 aaKnown RBP10.07□□□□□ -0.8
PHGDH-231ENST00000641939 NIT1Q86X76 327 aa10.07□□□□□ -0.8
PHGDH-231ENST00000641939 DAZ3Q9NR90 486 aaKnown RBP10.07□□□□□ -0.8
PHGDH-231ENST00000641939 URGCP-MRPS24S4R325 110 aa10.07□□□□□ -0.8
PHGDH-231ENST00000641939 APOBP04114 4563 aaKnown RBP10.07□□□□□ -0.8
PHGDH-231ENST00000641939 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
PHGDH-231ENST00000641939 CDK2AP2O75956 126 aa10.06□□□□□ -0.8
PHGDH-231ENST00000641939 CDPF1Q6NVV7 123 aa10.06□□□□□ -0.8
PHGDH-231ENST00000641939 WDR73Q6P4I2 378 aa10.06□□□□□ -0.8
PHGDH-231ENST00000641939 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
PHGDH-231ENST00000641939 NTF3P20783 257 aa10.05□□□□□ -0.8
PHGDH-231ENST00000641939 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
PHGDH-231ENST00000641939 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
PHGDH-231ENST00000641939 CNFNQ9BYD5 112 aa10.05□□□□□ -0.8
PHGDH-231ENST00000641939 A0A087WX48 190 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 H7C1H1 209 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 M0QY20 66 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
PHGDH-231ENST00000641939 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.8
PHGDH-231ENST00000641939 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 KCNIP4Q6PIL6 250 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 FAM231DQ6ZW35 169 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 SMIM7Q9BQ49 75 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 DPH3P1Q9H4G8 78 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 PCLOQ9Y6V0 5065 aa10.04□□□□□ -0.8
PHGDH-231ENST00000641939 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
PHGDH-231ENST00000641939 SRP19P09132 144 aaKnown RBP10.03□□□□□ -0.8
PHGDH-231ENST00000641939 TWIST1Q15672 202 aa10.03□□□□□ -0.8
PHGDH-231ENST00000641939 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
PHGDH-231ENST00000641939 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
PHGDH-231ENST00000641939 ELOBQ15370 118 aa10.02□□□□□ -0.81
PHGDH-231ENST00000641939 TEX261Q6UWH6 196 aa10.02□□□□□ -0.81
PHGDH-231ENST00000641939 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
PHGDH-231ENST00000641939 KLK12Q9UKR0 248 aa10.02□□□□□ -0.81
PHGDH-231ENST00000641939 A8MWL6 223 aa10.01□□□□□ -0.81
PHGDH-231ENST00000641939 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
PHGDH-231ENST00000641939 CT83Q5H943 113 aa10.01□□□□□ -0.81
PHGDH-231ENST00000641939 RASL11AQ6T310 242 aa10.01□□□□□ -0.81
PHGDH-231ENST00000641939 LINC01551Q86U37 167 aa10.01□□□□□ -0.81
PHGDH-231ENST00000641939 PKIAP61925 76 aa10□□□□□ -0.81
PHGDH-231ENST00000641939 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
PHGDH-231ENST00000641939 UBE2WQ96B02 151 aa10□□□□□ -0.81
PHGDH-231ENST00000641939 RMI2Q96E14 147 aa10□□□□□ -0.81
PHGDH-231ENST00000641939 CHCHD5Q9BSY4 110 aa10□□□□□ -0.81
PHGDH-231ENST00000641939 COX11Q9Y6N1 276 aa10□□□□□ -0.81
PHGDH-231ENST00000641939 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
PHGDH-231ENST00000641939 Q8N814 137 aa9.99□□□□□ -0.81
PHGDH-231ENST00000641939 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-231ENST00000641939 NIT2Q9NQR4 276 aa9.99□□□□□ -0.81
PHGDH-231ENST00000641939 TRBV25-1A0A075B6N4 114 aa9.98□□□□□ -0.81
PHGDH-231ENST00000641939 FOXA3P55318 350 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-231ENST00000641939 FAM74A3Q4VXF1 159 aa9.98□□□□□ -0.81
PHGDH-231ENST00000641939 MPV17L2Q567V2 206 aa9.98□□□□□ -0.81
PHGDH-231ENST00000641939 PGLYRP4Q96LB8 373 aa9.98□□□□□ -0.81
PHGDH-231ENST00000641939 OSTCQ9NRP0 149 aa9.98□□□□□ -0.81
PHGDH-231ENST00000641939 IGKV2D-24A0A075B6R9 120 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 Q0VG73 95 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 IQCJQ1A5X6 159 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 TSKUQ8WUA8 353 aa9.97□□□□□ -0.81
PHGDH-231ENST00000641939 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 C9JQL5 133 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 ANGP03950 147 aaKnown RBP9.96□□□□□ -0.82
PHGDH-231ENST00000641939 GCSHP23434 173 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 KRTAP10-1P60331 282 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 GAGE6Q13070 117 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 WFDC2Q14508 124 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 PEA15Q15121 130 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 ATRAIDQ6UW56 229 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 FRZBQ92765 325 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 BORCS7Q96B45 105 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 SMDT1Q9H4I9 107 aa9.96□□□□□ -0.82
PHGDH-231ENST00000641939 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
PHGDH-231ENST00000641939 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
PHGDH-231ENST00000641939 HIGD1CA8MV81 97 aa9.95□□□□□ -0.82
PHGDH-231ENST00000641939 LECT2O14960 151 aa9.95□□□□□ -0.82
PHGDH-231ENST00000641939 CRPP02741 224 aa9.95□□□□□ -0.82
PHGDH-231ENST00000641939 Q8N976 141 aa9.95□□□□□ -0.82
PHGDH-231ENST00000641939 A0A1B0GUT8 65 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
PHGDH-231ENST00000641939 RBX1P62877 108 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
PHGDH-231ENST00000641939 ENHOQ6UWT2 76 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 BAALCQ8WXS3 180 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 ISOC2Q96AB3 205 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 NAT8Q9UHE5 227 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 V9GYV3 84 aa9.94□□□□□ -0.82
PHGDH-231ENST00000641939 COTL1Q14019 142 aa9.93□□□□□ -0.82
PHGDH-231ENST00000641939 ADIRFQ15847 76 aa9.93□□□□□ -0.82
PHGDH-231ENST00000641939 TMEM243Q9BU79 118 aa9.93□□□□□ -0.82
PHGDH-231ENST00000641939 MIAQ16674 131 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms