RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 CCDC168Q8NDH2 2452 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 MAP1AP78559 2803 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-214ENST00000639038 FSHBP01225 129 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 MP68P56378 58 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
NECAP1-214ENST00000639038 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
NECAP1-214ENST00000639038 LCA10Q71F78 164 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 PRNTQ86SH4 94 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 DYNAPQ8N1N2 210 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 NMES1Q9C002 83 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 CREBBPQ92793 2442 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 ITPR3Q14573 2671 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 TRAV40A0A0B4J280 105 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 IGHV4-38-2P0DP08 117 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 RNF5Q99942 180 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 HIGD1BQ9P298 99 aa6.26□□□□□ -1.41
NECAP1-214ENST00000639038 A0A0G2JRQ6 117 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 IGKV1-16P04430 117 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 KRTAP1-1Q07627 177 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 RNF126Q9BV68 326 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 ABCA1O95477 2261 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 LINC00313P59037 77 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
NECAP1-214ENST00000639038 IGHV3OR16-10A0A075B7F0 116 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 IGHV3-72A0A0B4J1Y9 119 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 IGLV2-23P01705 113 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 DYNLT3P51808 116 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 Q6ZRM9 215 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 Q8N2B8 174 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 MRPL18Q9H0U6 180 aaKnown RBP6.24□□□□□ -1.41
NECAP1-214ENST00000639038 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 hDV102S1A0JD36 115 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 PRH1P02810 166 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 BRD3OSQ6XYD6 125 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 MGST2Q99735 147 aa6.24□□□□□ -1.41
NECAP1-214ENST00000639038 NXT2Q9NPJ8 142 aaKnown RBP6.24□□□□□ -1.41
NECAP1-214ENST00000639038 ADARB2-AS1A8MUL3 147 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 APCSP02743 223 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 SCGB1C2P0DMR2 95 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 PRR3P79522 188 aaKnown RBP6.23□□□□□ -1.41
NECAP1-214ENST00000639038 ZNF329Q86UD4 541 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 Q8N6K4 173 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 TAF15Q92804 592 aaKnown RBP eCLIP6.23□□□□□ -1.41
NECAP1-214ENST00000639038 MYO9AB2RTY4 2548 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 CSMD1Q96PZ7 3565 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 FAM181BA6NEQ2 426 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 UPK2O00526 184 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 COX7A2LO14548 114 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 IGKV1D-33P01593 117 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 IGKV1-33P01594 117 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 SAA1P0DJI8 122 aaPredicted RBP6.23□□□□□ -1.41
NECAP1-214ENST00000639038 CYP2G1PQ6ZSU1 146 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
NECAP1-214ENST00000639038 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
NECAP1-214ENST00000639038 NPBQ8NG41 125 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 TMEM167AQ8TBQ9 72 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 NTN5Q8WTR8 489 aaPredicted RBP6.23□□□□□ -1.41
NECAP1-214ENST00000639038 LINC00588Q9Y4M8 146 aa6.23□□□□□ -1.41
NECAP1-214ENST00000639038 ZANQ9Y493 2812 aa6.22□□□□□ -1.41
NECAP1-214ENST00000639038 BAHCC1Q9P281 2608 aa6.22□□□□□ -1.41
NECAP1-214ENST00000639038 UBE2L5PA0A1B0GUS4 154 aa6.22□□□□□ -1.41
NECAP1-214ENST00000639038 TIMM17BO60830 172 aa6.22□□□□□ -1.41
NECAP1-214ENST00000639038 PSMB2P49721 201 aa6.22□□□□□ -1.41
NECAP1-214ENST00000639038 HERVK_113P61574 105 aa6.22□□□□□ -1.41
NECAP1-214ENST00000639038 UBE2L3P68036 154 aaKnown RBP6.22□□□□□ -1.41
NECAP1-214ENST00000639038 FLNAP21333 2647 aaKnown RBP6.22□□□□□ -1.41
NECAP1-214ENST00000639038 TRAV3A0A0B4J244 114 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 C15orf62A8K5M9 175 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 NDUFA3O95167 84 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 C6orf99Q4VX62 202 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 EBLN2Q6P2I7 272 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.41
NECAP1-214ENST00000639038 TMEM14BQ9NUH8 114 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 EPDR1Q9UM22 224 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 NOTCH2Q04721 2471 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 TEX15Q9BXT5 2789 aa6.21□□□□□ -1.41
NECAP1-214ENST00000639038 CSPG4Q6UVK1 2322 aa6.21□□□□□ -1.42
NECAP1-214ENST00000639038 C2orf70A6NJV1 201 aa6.21□□□□□ -1.42
NECAP1-214ENST00000639038 H0YIZ8 118 aa6.21□□□□□ -1.42
NECAP1-214ENST00000639038 MRGPRG-AS1Q2M3A8 158 aa6.21□□□□□ -1.42
NECAP1-214ENST00000639038 C11orf1Q9H5F2 150 aa6.21□□□□□ -1.42
NECAP1-214ENST00000639038 ZNF469Q96JG9 3925 aaPredicted RBP6.21□□□□□ -1.42
NECAP1-214ENST00000639038 IGHV3OR16-9A0A0B4J2B5 98 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 TRBV12-3P01733 135 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 CD24P25063 80 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 RPL23P62829 140 aaKnown RBP6.2□□□□□ -1.42
NECAP1-214ENST00000639038 MORN5Q5VZ52 161 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 ZNF491Q8N8L2 437 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 DEFB112Q30KQ8 113 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 TSKUQ8WUA8 353 aa6.2□□□□□ -1.42
NECAP1-214ENST00000639038 ANK3Q12955 4377 aaKnown RBP6.2□□□□□ -1.42
NECAP1-214ENST00000639038 TET2Q6N021 2002 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-214ENST00000639038 A6NDX4 124 aa6.19□□□□□ -1.42
NECAP1-214ENST00000639038 F2Z2F3 143 aa6.19□□□□□ -1.42
NECAP1-214ENST00000639038 HIST1H4AP62805 103 aaKnown RBP6.19□□□□□ -1.42
NECAP1-214ENST00000639038 TREML4Q6UXN2 200 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms