RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
SCARB2-214ENST00000638843 IGHV3-33P01772 117 aa6.42□□□□□ -1.38
SCARB2-214ENST00000638843 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
SCARB2-214ENST00000638843 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
SCARB2-214ENST00000638843 ZNF56Q15929 161 aa6.42□□□□□ -1.38
SCARB2-214ENST00000638843 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
SCARB2-214ENST00000638843 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
SCARB2-214ENST00000638843 TRBV7-3A0A075B6L6 115 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 F2Z2F3 143 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 F5H697 171 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 UBE2D3P61077 147 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 UBE2D2P62837 147 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 C10orf126Q8N4M7 172 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 OR10G8Q8NGN5 311 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 AP1S3Q96PC3 154 aa6.41□□□□□ -1.38
SCARB2-214ENST00000638843 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
SCARB2-214ENST00000638843 A0A087WWC5 75 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 IBA57-AS1B1ANH7 110 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 C9JQL5 133 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 SRP19P09132 144 aaKnown RBP6.4□□□□□ -1.38
SCARB2-214ENST00000638843 SMIM17P0DL12 118 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 NTF3P20783 257 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 CACNG7P62955 275 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 RPL36AP83881 106 aaKnown RBP6.4□□□□□ -1.38
SCARB2-214ENST00000638843 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 NFE4Q86UQ8 179 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 GTSF1Q8WW33 167 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 RPL36ALQ969Q0 106 aaKnown RBP6.4□□□□□ -1.38
SCARB2-214ENST00000638843 SMIM7Q9BQ49 75 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 HSPG2P98160 4391 aa6.4□□□□□ -1.38
SCARB2-214ENST00000638843 NDUFS6O75380 124 aaKnown RBP6.4□□□□□ -1.39
SCARB2-214ENST00000638843 CTRLP40313 264 aa6.4□□□□□ -1.39
SCARB2-214ENST00000638843 SRSF3P84103 164 aaKnown RBP6.4□□□□□ -1.39
SCARB2-214ENST00000638843 LINC01551Q86U37 167 aa6.4□□□□□ -1.39
SCARB2-214ENST00000638843 CNFNQ9BYD5 112 aa6.4□□□□□ -1.39
SCARB2-214ENST00000638843 ZNF727A8MUV8 499 aa6.39□□□□□ -1.39
SCARB2-214ENST00000638843 C16orf90A8MZG2 172 aa6.39□□□□□ -1.39
SCARB2-214ENST00000638843 M0QY20 66 aa6.39□□□□□ -1.39
SCARB2-214ENST00000638843 WDR73Q6P4I2 378 aa6.39□□□□□ -1.39
SCARB2-214ENST00000638843 FAM231DQ6ZW35 169 aa6.39□□□□□ -1.39
SCARB2-214ENST00000638843 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
SCARB2-214ENST00000638843 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
SCARB2-214ENST00000638843 GATCO43716 136 aaKnown RBP6.38□□□□□ -1.39
SCARB2-214ENST00000638843 MGPP08493 103 aa6.38□□□□□ -1.39
SCARB2-214ENST00000638843 FUSP35637 526 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCARB2-214ENST00000638843 ERVFC1-1P60608 527 aa6.38□□□□□ -1.39
SCARB2-214ENST00000638843 TWIST1Q15672 202 aa6.38□□□□□ -1.39
SCARB2-214ENST00000638843 NIT1Q86X76 327 aa6.38□□□□□ -1.39
SCARB2-214ENST00000638843 Q9HAA7 133 aa6.38□□□□□ -1.39
SCARB2-214ENST00000638843 A0A087WTM6 91 aa6.37□□□□□ -1.39
SCARB2-214ENST00000638843 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
SCARB2-214ENST00000638843 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
SCARB2-214ENST00000638843 FOXA3P55318 350 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-214ENST00000638843 LAGE3Q14657 143 aa6.37□□□□□ -1.39
SCARB2-214ENST00000638843 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
SCARB2-214ENST00000638843 A8MWL6 223 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 CT83Q5H943 113 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 PGLYRP4Q96LB8 373 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 DNAJC30Q96LL9 226 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 DPH3P1Q9H4G8 78 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
SCARB2-214ENST00000638843 LRCOL1A6NCL2 159 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 TMEM241Q24JQ0 296 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 A0A087WX48 190 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 TRAV26-2A0A0B4J265 109 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 TMEM262E9PQX1 116 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 H7C1H1 209 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 PSCAO43653 123 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 RPL23P62829 140 aaKnown RBP6.35□□□□□ -1.39
SCARB2-214ENST00000638843 PEA15Q15121 130 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 RASL11AQ6T310 242 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 TSKUQ8WUA8 353 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 OSTCQ9NRP0 149 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 KLK12Q9UKR0 248 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 URGCP-MRPS24S4R325 110 aa6.35□□□□□ -1.39
SCARB2-214ENST00000638843 TRAV8-3A0A0A6YYJ7 113 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 HIGD1CA8MV81 97 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 FAM74A3Q4VXF1 159 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 MPV17L2Q567V2 206 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 MAPKAPK5-AS1Q8N8E1 139 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.34□□□□□ -1.39
SCARB2-214ENST00000638843 GATD1Q8NB37 220 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 DEFB104AQ8WTQ1 72 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 ISOC2Q96AB3 205 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 CHCHD5Q9BSY4 110 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 NIT2Q9NQR4 276 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 V9GYV3 84 aa6.34□□□□□ -1.39
SCARB2-214ENST00000638843 FAT1Q14517 4588 aa6.33□□□□□ -1.4
SCARB2-214ENST00000638843 ADIRFQ15847 76 aa6.33□□□□□ -1.4
SCARB2-214ENST00000638843 CHCHD7Q9BUK0 85 aa6.33□□□□□ -1.4
SCARB2-214ENST00000638843 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
SCARB2-214ENST00000638843 SMDT1Q9H4I9 107 aa6.33□□□□□ -1.4
SCARB2-214ENST00000638843 NAT8Q9UHE5 227 aa6.33□□□□□ -1.4
SCARB2-214ENST00000638843 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
SCARB2-214ENST00000638843 FAM231BA6NCW3 169 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms