RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 LAMA5O15230 3695 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHV3-64A0A075B6Q5 118 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 PYGO1Q9Y3Y4 419 aa10.98□□□□□ -0.65
CACNA1A-220ENST00000635988 CACNA1BQ00975 2339 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 TRAV4A0A0B4J268 109 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 MRPL23Q16540 153 aaKnown RBP10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 FAM110AQ9BQ89 295 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 AKAP13Q12802 2813 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 B5MCH6 92 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 H3BT86 120 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 TRIAP1O43715 76 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
CACNA1A-220ENST00000635988 GAGE12JA6NER3 117 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 GAGE7O76087 117 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 GAGE12FP0CL80 117 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 GAGE12GP0CL81 117 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 GAGE12IP0CL82 117 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 GAGE4Q13068 117 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 SPANXDQ9BXN6 97 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 SPANXCQ9NY87 97 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 GVINP1Q7Z2Y8 2422 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 CSMD1Q96PZ7 3565 aa10.96□□□□□ -0.65
CACNA1A-220ENST00000635988 IGHV1OR15-1A0A075B7D0 117 aa10.96□□□□□ -0.66
CACNA1A-220ENST00000635988 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.66
CACNA1A-220ENST00000635988 A0A1W2PPR1 153 aa10.96□□□□□ -0.66
CACNA1A-220ENST00000635988 ELANEP08246 267 aa10.96□□□□□ -0.66
CACNA1A-220ENST00000635988 C2orf82Q6UX34 121 aa10.96□□□□□ -0.66
CACNA1A-220ENST00000635988 ATMQ13315 3056 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 LITAFQ99732 161 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 BEX4Q9NWD9 120 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 CRLF1O75462 422 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 IGLV1-40P01703 118 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 SPXQ9BT56 116 aa10.95□□□□□ -0.66
CACNA1A-220ENST00000635988 PRSS2P07478 247 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 CD28P10747 220 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 KLRB1Q12918 225 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 DCHS2Q6V1P9 2916 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 SNRPD3P62318 126 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 EDA2RQ9HAV5 297 aa10.94□□□□□ -0.66
CACNA1A-220ENST00000635988 LRBAP50851 2863 aa10.93□□□□□ -0.66
CACNA1A-220ENST00000635988 BRD3OSQ6XYD6 125 aa10.93□□□□□ -0.66
CACNA1A-220ENST00000635988 YAE1D1Q9NRH1 226 aa10.93□□□□□ -0.66
CACNA1A-220ENST00000635988 TRGV11A0A075B6L2 103 aa10.93□□□□□ -0.66
CACNA1A-220ENST00000635988 FAM240AA0A1B0GVK7 77 aa10.93□□□□□ -0.66
CACNA1A-220ENST00000635988 A6NDX4 124 aa10.93□□□□□ -0.66
CACNA1A-220ENST00000635988 LY6EQ16553 131 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 MIAQ16674 131 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 NDUFA12Q9UI09 145 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 MED13LQ71F56 2210 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 H7C423 109 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 HERV-K104P63124 156 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 FOXC1Q12948 553 aa10.92□□□□□ -0.66
CACNA1A-220ENST00000635988 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
CACNA1A-220ENST00000635988 ZNF580Q9UK33 172 aa10.91□□□□□ -0.66
CACNA1A-220ENST00000635988 TINCRA0A1B0GVN0 87 aa10.9□□□□□ -0.66
CACNA1A-220ENST00000635988 H3BUX3 64 aa10.9□□□□□ -0.66
CACNA1A-220ENST00000635988 SPTBN2O15020 2390 aa10.9□□□□□ -0.66
CACNA1A-220ENST00000635988 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.67
CACNA1A-220ENST00000635988 TIMM17BO60830 172 aa10.9□□□□□ -0.67
CACNA1A-220ENST00000635988 DEFB121Q5J5C9 76 aa10.9□□□□□ -0.67
CACNA1A-220ENST00000635988 VSIG2Q96IQ7 327 aa10.9□□□□□ -0.67
CACNA1A-220ENST00000635988 TLN1Q9Y490 2541 aaKnown RBP10.9□□□□□ -0.67
CACNA1A-220ENST00000635988 LST1O00453 97 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 CFHR3Q02985 330 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 RNF152Q8N8N0 203 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 ZNF292O60281 2723 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 TRAV8-3A0A0A6YYJ7 113 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 BLCAPP62952 87 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
CACNA1A-220ENST00000635988 K7EQG2 157 aa10.88□□□□□ -0.67
CACNA1A-220ENST00000635988 EDN2P20800 178 aa10.88□□□□□ -0.67
CACNA1A-220ENST00000635988 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
CACNA1A-220ENST00000635988 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
CACNA1A-220ENST00000635988 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
CACNA1A-220ENST00000635988 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
CACNA1A-220ENST00000635988 CCDC179H3BU77 68 aa10.87□□□□□ -0.67
CACNA1A-220ENST00000635988 NBL1P41271 181 aa10.87□□□□□ -0.67
CACNA1A-220ENST00000635988 SMIM20Q8N5G0 67 aa10.87□□□□□ -0.67
CACNA1A-220ENST00000635988 FAM104AQ969W3 186 aa10.87□□□□□ -0.67
CACNA1A-220ENST00000635988 UCNP55089 124 aa10.86□□□□□ -0.67
CACNA1A-220ENST00000635988 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
CACNA1A-220ENST00000635988 HRNRQ86YZ3 2850 aaPredicted RBP10.85□□□□□ -0.67
CACNA1A-220ENST00000635988 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-220ENST00000635988 CLEC2BQ92478 149 aa10.85□□□□□ -0.67
CACNA1A-220ENST00000635988 ACYP1P07311 99 aa10.84□□□□□ -0.67
CACNA1A-220ENST00000635988 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
CACNA1A-220ENST00000635988 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
CACNA1A-220ENST00000635988 PSMB8P28062 276 aa10.84□□□□□ -0.67
CACNA1A-220ENST00000635988 CIRBPQ14011 172 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-220ENST00000635988 PIMREGQ9BSJ6 248 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms