RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 H7C423 109 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 LYPD5Q6UWN5 251 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 MPLKIPQ8TAP9 179 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 GFRA4Q9GZZ7 299 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 NOTCH2Q04721 2471 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 IGKV1-5P01602 117 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 LYPD2Q6UXB3 125 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 H7BZZ5 65 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 CCL3L1P16619 93 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 ZNF497Q6ZNH5 498 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
USB1-216ENST00000624720 CCDC168Q8NDH2 2452 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 DSCAMO60469 2012 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 TMEM30CPA0ZSE6 113 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 ECSCRQ19T08 205 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 RPL39P5Q59GN2 51 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 CELSR2Q9HCU4 2923 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 INAFM2P0DMQ5 153 aa6.93□□□□□ -1.3
USB1-216ENST00000624720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.93□□□□□ -1.3
USB1-216ENST00000624720 FAM223BA6NKX1 122 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 SRRM5B3KS81 715 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 C19orf84I3L1E1 186 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 XCL1P47992 114 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 Q8IYB0 196 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 Q8N2B8 174 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
USB1-216ENST00000624720 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 CSPG4Q6UVK1 2322 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
USB1-216ENST00000624720 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
USB1-216ENST00000624720 SMKR1H3BMG3 65 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 IGHV3-33P01772 117 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
USB1-216ENST00000624720 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
USB1-216ENST00000624720 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 RBMY1FQ15415 496 aaKnown RBP6.92□□□□□ -1.3
USB1-216ENST00000624720 PVRIGQ6DKI7 326 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 SPATA3Q8NHX4 192 aa6.92□□□□□ -1.3
USB1-216ENST00000624720 H7C2G1 150 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 Q1RN00 199 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 SLC25A29Q8N8R3 303 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 FANCD2OSQ96PS1 177 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 IGLV3-9A0A075B6K5 115 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 A0A1W2PPR1 153 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 PLNP26678 52 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 RIGQ13278 110 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 C7orf69Q9H7B7 122 aa6.91□□□□□ -1.3
USB1-216ENST00000624720 A0A1B0GUT8 65 aa6.9□□□□□ -1.3
USB1-216ENST00000624720 ZNF134P52741 427 aa6.9□□□□□ -1.3
USB1-216ENST00000624720 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.3
USB1-216ENST00000624720 IGHV3-72A0A0B4J1Y9 119 aa6.9□□□□□ -1.3
USB1-216ENST00000624720 C17orf98A8MV24 154 aa6.9□□□□□ -1.3
USB1-216ENST00000624720 D6R8Y8 96 aa6.9□□□□□ -1.3
USB1-216ENST00000624720 PRSS2P07478 247 aa6.9□□□□□ -1.3
USB1-216ENST00000624720 SUB1P53999 127 aaKnown RBP eCLIP6.9□□□□□ -1.3
USB1-216ENST00000624720 ZFHX3Q15911 3703 aa6.9□□□□□ -1.31
USB1-216ENST00000624720 NDUFA3O95167 84 aa6.9□□□□□ -1.31
USB1-216ENST00000624720 MIR17HGQ75NE6 70 aa6.9□□□□□ -1.31
USB1-216ENST00000624720 TMEM75Q8N9X5 138 aa6.9□□□□□ -1.31
USB1-216ENST00000624720 BBC3Q96PG8 261 aaPredicted RBP6.9□□□□□ -1.31
USB1-216ENST00000624720 LINC00473A8K010 186 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 PLXNB1O43157 2135 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 IGLV2-14P01704 120 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 APELAP0DMC3 54 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 C1orf229Q6ZS94 237 aaPredicted RBP6.89□□□□□ -1.31
USB1-216ENST00000624720 ORMDL3Q8N138 153 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 M0R378 163 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 NDUFB3O43676 98 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 FXYD5Q96DB9 178 aa6.89□□□□□ -1.31
USB1-216ENST00000624720 VCYO14598 125 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 GAFA1Q96PS6 74 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 DOPEY1Q5JWR5 2465 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 COX7A1P24310 79 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 CTSZQ9UBR2 303 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 TNCP24821 2201 aa6.88□□□□□ -1.31
USB1-216ENST00000624720 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 DOPEY2Q9Y3R5 2298 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 TRBV27A0A0K0K1C4 114 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 IGHV3-30P01768 117 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 IGHV3-30-5P0DP03 117 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 FASNP49327 2511 aaKnown RBP6.87□□□□□ -1.31
USB1-216ENST00000624720 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 A0A087WVE0 104 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 PROP1O75360 226 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 THAP8Q8NA92 274 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 U3KQK5 164 aa6.87□□□□□ -1.31
USB1-216ENST00000624720 TRAV3A0A0B4J244 114 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 OVOL3O00110 214 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 LHBP01229 141 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms