RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KIAA1109Q2LD37 5005 aa12.18□□□□□ -0.46
SEMA3B-211ENST00000612509 A8MWL6 223 aa12.18□□□□□ -0.46
SEMA3B-211ENST00000612509 PEA15Q15121 130 aa12.18□□□□□ -0.46
SEMA3B-211ENST00000612509 IBA57-AS1B1ANH7 110 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 M0QY20 66 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 TWIST1Q15672 202 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 FAM74A3Q4VXF1 159 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 SMDT1Q9H4I9 107 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 HERC2O95714 4834 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 DNAH5Q8TE73 4624 aa12.17□□□□□ -0.46
SEMA3B-211ENST00000612509 H7C1H1 209 aa12.16□□□□□ -0.46
SEMA3B-211ENST00000612509 LAGE3Q14657 143 aa12.16□□□□□ -0.46
SEMA3B-211ENST00000612509 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
SEMA3B-211ENST00000612509 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 NIT1Q86X76 327 aa12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 PGLYRP4Q96LB8 373 aa12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 LRP1BQ9NZR2 4599 aa12.15□□□□□ -0.46
SEMA3B-211ENST00000612509 ADIRFQ15847 76 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 TMEM241Q24JQ0 296 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 DAZ4Q86SG3 579 aaKnown RBP12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 C15orf54Q8N8G6 183 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 Q9HAA7 133 aa12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 DAZ3Q9NR90 486 aaKnown RBP12.14□□□□□ -0.47
SEMA3B-211ENST00000612509 TRBV6-8A0A0A6YYG3 113 aa12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 RASL11AQ6T310 242 aa12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 V9GYV3 84 aa12.13□□□□□ -0.47
SEMA3B-211ENST00000612509 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
SEMA3B-211ENST00000612509 KRTAP10-2P60368 255 aa12.12□□□□□ -0.47
SEMA3B-211ENST00000612509 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
SEMA3B-211ENST00000612509 CHCHD7Q9BUK0 85 aa12.12□□□□□ -0.47
SEMA3B-211ENST00000612509 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
SEMA3B-211ENST00000612509 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
SEMA3B-211ENST00000612509 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
SEMA3B-211ENST00000612509 RYR1P21817 5038 aa12.11□□□□□ -0.47
SEMA3B-211ENST00000612509 A0A087WTM6 91 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 A0A087WX48 190 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 EREGO14944 169 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 PSCAO43653 123 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 RAB14P61106 215 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
SEMA3B-211ENST00000612509 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
SEMA3B-211ENST00000612509 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
SEMA3B-211ENST00000612509 NIT2Q9NQR4 276 aa12.09□□□□□ -0.47
SEMA3B-211ENST00000612509 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
SEMA3B-211ENST00000612509 GATD1Q8NB37 220 aa12.08□□□□□ -0.48
SEMA3B-211ENST00000612509 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.48
SEMA3B-211ENST00000612509 TRBV25-1A0A075B6N4 114 aa12.07□□□□□ -0.48
SEMA3B-211ENST00000612509 PKIAP61925 76 aa12.07□□□□□ -0.48
SEMA3B-211ENST00000612509 MPV17L2Q567V2 206 aa12.07□□□□□ -0.48
SEMA3B-211ENST00000612509 FRZBQ92765 325 aa12.07□□□□□ -0.48
SEMA3B-211ENST00000612509 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
SEMA3B-211ENST00000612509 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 TMEM262E9PQX1 116 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 ELOBQ15370 118 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 CLLU1Q5K131 121 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 NUP35Q8NFH5 326 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
SEMA3B-211ENST00000612509 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
SEMA3B-211ENST00000612509 RPL39LQ96EH5 51 aaKnown RBP12.05□□□□□ -0.48
SEMA3B-211ENST00000612509 GAGE6Q13070 117 aa12.04□□□□□ -0.48
SEMA3B-211ENST00000612509 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
SEMA3B-211ENST00000612509 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
SEMA3B-211ENST00000612509 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
SEMA3B-211ENST00000612509 APOBP04114 4563 aaKnown RBP12.04□□□□□ -0.48
SEMA3B-211ENST00000612509 SMIM27A0A1W2PRY6 76 aa12.03□□□□□ -0.48
SEMA3B-211ENST00000612509 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
SEMA3B-211ENST00000612509 IFITM2Q01629 132 aa12.03□□□□□ -0.48
SEMA3B-211ENST00000612509 RIGQ13278 110 aa12.03□□□□□ -0.48
SEMA3B-211ENST00000612509 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
SEMA3B-211ENST00000612509 RMI2Q96E14 147 aa12.03□□□□□ -0.48
SEMA3B-211ENST00000612509 CRPP02741 224 aa12.02□□□□□ -0.49
SEMA3B-211ENST00000612509 COTL1Q14019 142 aa12.02□□□□□ -0.49
SEMA3B-211ENST00000612509 Q8N976 141 aa12.02□□□□□ -0.49
SEMA3B-211ENST00000612509 RNF185Q96GF1 192 aa12.02□□□□□ -0.49
SEMA3B-211ENST00000612509 TMEM243Q9BU79 118 aa12.02□□□□□ -0.49
SEMA3B-211ENST00000612509 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 RBX1P62877 108 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 Q0VG73 95 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 AMN1Q8IY45 258 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 PGPEP1Q9NXJ5 209 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 COX11Q9Y6N1 276 aa12.01□□□□□ -0.49
SEMA3B-211ENST00000612509 HSPG2P98160 4391 aa11.99□□□□□ -0.49
SEMA3B-211ENST00000612509 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
SEMA3B-211ENST00000612509 GAS8-AS1O95177 125 aa11.99□□□□□ -0.49
SEMA3B-211ENST00000612509 RAB4AP20338 218 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms