RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 HERC2O95714 4834 aa8.64□□□□□ -1.03
CD9-212ENST00000610354 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
CD9-212ENST00000610354 LINC00315P59091 139 aa8.64□□□□□ -1.03
CD9-212ENST00000610354 SSTP61278 116 aa8.64□□□□□ -1.03
CD9-212ENST00000610354 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
CD9-212ENST00000610354 DAZAP1Q96EP5 407 aaKnown RBP8.64□□□□□ -1.03
CD9-212ENST00000610354 MSRB1Q9NZV6 116 aa8.64□□□□□ -1.03
CD9-212ENST00000610354 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
CD9-212ENST00000610354 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
CD9-212ENST00000610354 A0A087WWC5 75 aa8.63□□□□□ -1.03
CD9-212ENST00000610354 NDUFS6O75380 124 aaKnown RBP8.63□□□□□ -1.03
CD9-212ENST00000610354 GTSF1LQ9H1H1 148 aa8.63□□□□□ -1.03
CD9-212ENST00000610354 LY96Q9Y6Y9 160 aa8.63□□□□□ -1.03
CD9-212ENST00000610354 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
CD9-212ENST00000610354 P01737 135 aa8.62□□□□□ -1.03
CD9-212ENST00000610354 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
CD9-212ENST00000610354 LELP1Q5T871 98 aa8.62□□□□□ -1.03
CD9-212ENST00000610354 SPANXN1Q5VSR9 72 aa8.62□□□□□ -1.03
CD9-212ENST00000610354 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
CD9-212ENST00000610354 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
CD9-212ENST00000610354 RNASE7Q9H1E1 156 aaKnown RBP8.62□□□□□ -1.03
CD9-212ENST00000610354 BTF3P20290 206 aaKnown RBP8.61□□□□□ -1.03
CD9-212ENST00000610354 RAB5AP20339 215 aa8.61□□□□□ -1.03
CD9-212ENST00000610354 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
CD9-212ENST00000610354 Q8N3U1 123 aa8.61□□□□□ -1.03
CD9-212ENST00000610354 YPEL4Q96NS1 127 aa8.61□□□□□ -1.03
CD9-212ENST00000610354 CEBPGP53567 150 aa8.6□□□□□ -1.03
CD9-212ENST00000610354 RAB4BP61018 213 aa8.6□□□□□ -1.03
CD9-212ENST00000610354 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
CD9-212ENST00000610354 IGHV3-38A0A0C4DH36 116 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 UBE2D3P61077 147 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 UBE2D2P62837 147 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 PNRC1Q12796 327 aaPredicted RBP8.59□□□□□ -1.03
CD9-212ENST00000610354 ZNF56Q15929 161 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 LINC01556Q5JQF7 62 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 OR10J3Q5JRS4 329 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 OR10G8Q8NGN5 311 aa8.59□□□□□ -1.03
CD9-212ENST00000610354 RPP21Q9H633 154 aaKnown RBP8.59□□□□□ -1.03
CD9-212ENST00000610354 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 TRBV10-1A0A0K0K1A3 114 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 IGHV3-30P01768 117 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 IGHV3-33P01772 117 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 S100A8P05109 93 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 IGHV3-30-3P0DP02 117 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 IGHV3-30-5P0DP03 117 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 EVI2AP22794 236 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 CTRLP40313 264 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 AKR1D1P51857 326 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 CACNG7P62955 275 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 FAM231DQ6ZW35 169 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
CD9-212ENST00000610354 TRAV9-2A0A087WT02 112 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 XKRY2A2RUG3 117 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 F2Z2F3 143 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 S100A6P06703 90 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 NTF3P20783 257 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 ISOC2Q96AB3 205 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 AP1S3Q96PC3 154 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 SMIM7Q9BQ49 75 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 RYR1P21817 5038 aa8.57□□□□□ -1.04
CD9-212ENST00000610354 APOBP04114 4563 aaKnown RBP8.57□□□□□ -1.04
CD9-212ENST00000610354 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 IBA57-AS1B1ANH7 110 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 F5H697 171 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 K7EP13 123 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
CD9-212ENST00000610354 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
CD9-212ENST00000610354 WDR73Q6P4I2 378 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
CD9-212ENST00000610354 CNFNQ9BYD5 112 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
CD9-212ENST00000610354 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
CD9-212ENST00000610354 ZNF727A8MUV8 499 aa8.55□□□□□ -1.04
CD9-212ENST00000610354 M0QY20 66 aa8.55□□□□□ -1.04
CD9-212ENST00000610354 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
CD9-212ENST00000610354 SNRPEP62304 92 aaKnown RBP8.55□□□□□ -1.04
CD9-212ENST00000610354 S100A12P80511 92 aa8.55□□□□□ -1.04
CD9-212ENST00000610354 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
CD9-212ENST00000610354 MGPP08493 103 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 SPATA12Q7Z6I5 190 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
CD9-212ENST00000610354 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 C12orf57Q99622 126 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 CTDSP1Q9GZU7 261 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
CD9-212ENST00000610354 HSPG2P98160 4391 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 FOXA3P55318 350 aaPredicted RBP8.54□□□□□ -1.04
CD9-212ENST00000610354 ERVFC1-1P60608 527 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 ELOBQ15370 118 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 NIT1Q86X76 327 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
CD9-212ENST00000610354 A8MWL6 223 aa8.53□□□□□ -1.04
CD9-212ENST00000610354 TRGC1P0CF51 173 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms