RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 ERG28Q9UKR5 140 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 EPG5Q9HCE0 2579 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 GVINP1Q7Z2Y8 2422 aa-0.78□□□□□ -2.53
TUBE1-205ENST00000603651 LAMC1P11047 1609 aa-0.78□□□□□ -2.54
TUBE1-205ENST00000603651 HECTD1Q9ULT8 2610 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 PLXNB2O15031 1838 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 PLCE1Q9P212 2302 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 TRAV12-3A0A0B4J271 114 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 PFDN1O60925 122 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 MT-ND4LP03901 98 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 GNG10P50151 68 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 SPCS2Q15005 226 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 ATP6V0E2Q8NHE4 81 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 WFDC6Q9BQY6 131 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 NOP16Q9Y3C1 178 aaKnown RBP-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 KIAA0100Q14667 2235 aaKnown RBP-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 DNAH6Q9C0G6 4158 aa-0.79□□□□□ -2.54
TUBE1-205ENST00000603651 BCL9LQ86UU0 1499 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 OVOS2A0A0G2JMS6 1433 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 IFT172Q9UG01 1749 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 TRAV22A0A0B4J277 110 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 CLPSL1A2RUU4 121 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 HLA-DRB4P13762 266 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 EDDM3BP56851 147 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 TOMM20LQ6UXN7 152 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 ATP11AUNQ6ZP68 121 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 CDC26Q8NHZ8 85 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 SCP2D1Q9UJQ7 156 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 HLA-DRB4X5D2U9 266 aa-0.8□□□□□ -2.54
TUBE1-205ENST00000603651 PKHD1L1Q86WI1 4243 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 IBTKQ9P2D0 1353 aaPredicted RBP-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 USF3Q68DE3 2245 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 MUC17Q685J3 4493 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 TRAV1-2A0A0B4J238 106 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 CCDC179H3BU77 68 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 TMEM128Q5BJH2 165 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 Q5VV11 94 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 TMEM244Q5VVB8 128 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 SMPXQ9UHP9 88 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 WNK3Q9BYP7 1800 aa-0.81□□□□□ -2.54
TUBE1-205ENST00000603651 ITPR3Q14573 2671 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 DNAH3Q8TD57 4116 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 KDM3BQ7LBC6 1761 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 E5RI56 91 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 J3QLW9 94 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 M0R2P5 195 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 PIN1P1O15428 100 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 DPM2O94777 84 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 PAEPP09466 180 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 CLLU1Q5K131 121 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 BANF2Q9H503 90 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 CALML5Q9NZT1 146 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 LSM2Q9Y333 95 aaKnown RBP-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 SPTA1P02549 2419 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 C10orf71Q711Q0 1435 aa-0.82□□□□□ -2.54
TUBE1-205ENST00000603651 RNF213Q63HN8 5207 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 PBRM1Q86U86 1689 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 ERCC6Q03468 1493 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 BORCS7-ASMTA0A0B4J1R7 106 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 K7EQZ3 153 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 BCE1O60756 84 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 SMIM24O75264 130 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 RBP4P02753 201 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 RPS28P62857 69 aaKnown RBP-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 HAMPP81172 84 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 KRTAP6-2Q3LI66 62 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 LINC01545Q5VT33 79 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 SAMD13Q5VXD3 122 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 OR8I2Q8N0Y5 310 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 TMEM35BQ8NCS4 154 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 NDUFA12Q9UI09 145 aa-0.83□□□□□ -2.54
TUBE1-205ENST00000603651 FASNP49327 2511 aaKnown RBP-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 J3KT08 172 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 UBE2D1P51668 147 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 KLK9Q2XQG4 91 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 PPP1R2P3Q6NXS1 205 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 MYO7BQ6PIF6 2116 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 C10orf82Q8WW14 230 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 SPCS1Q9Y6A9 102 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 CHD8Q9HCK8 2581 aa-0.84□□□□□ -2.54
TUBE1-205ENST00000603651 LRP6O75581 1613 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 MYH13Q9UKX3 1938 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 RYR2Q92736 4967 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 TRAV36DV7A0A075B6V5 113 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 I3L2K1 104 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 SYNJ1O43426 1573 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 YPEL1O60688 119 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 TNFSF15O95150 251 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 SCTP09683 121 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 SPRR2EP22531 72 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 TFAMQ00059 246 aaKnown RBP-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 SCN3BQ9NY72 215 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 PI4KAP42356 2102 aa-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 TEP1Q99973 2627 aaKnown RBP-0.85□□□□□ -2.55
TUBE1-205ENST00000603651 SONP18583 2426 aaKnown RBP-0.86□□□□□ -2.55
TUBE1-205ENST00000603651 ZNF609O15014 1411 aa-0.86□□□□□ -2.55
TUBE1-205ENST00000603651 LOC730098B7Z3J9 87 aa-0.86□□□□□ -2.55
TUBE1-205ENST00000603651 SPRR2AP35326 72 aa-0.86□□□□□ -2.55
TUBE1-205ENST00000603651 CFAP126Q5VTH2 177 aa-0.86□□□□□ -2.55
TUBE1-205ENST00000603651 HIGD1AQ9Y241 93 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms