RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 AEBP2Q6ZN18 517 aaPredicted RBP32.34■■■□□ 2.77
TUBE1-205ENST00000603651 CHIC1Q5VXU3 224 aa31.15■■■□□ 2.58
TUBE1-205ENST00000603651 SENP3Q9H4L4 574 aaPredicted RBP27.47■■□□□ 1.99
TUBE1-205ENST00000603651 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
TUBE1-205ENST00000603651 FOXD1Q16676 465 aa25.59■■□□□ 1.69
TUBE1-205ENST00000603651 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
TUBE1-205ENST00000603651 ADRA2BP18089 450 aa24.34■■□□□ 1.49
TUBE1-205ENST00000603651 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
TUBE1-205ENST00000603651 PIAS4Q8N2W9 510 aaPredicted RBP24.09■■□□□ 1.45
TUBE1-205ENST00000603651 MSH5O43196 834 aa23.7■■□□□ 1.38
TUBE1-205ENST00000603651 POTEDQ86YR6 584 aa22.39■■□□□ 1.17
TUBE1-205ENST00000603651 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
TUBE1-205ENST00000603651 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
TUBE1-205ENST00000603651 PPP4R3CPQ6ZMV5 832 aa22.14■■□□□ 1.13
TUBE1-205ENST00000603651 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
TUBE1-205ENST00000603651 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
TUBE1-205ENST00000603651 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
TUBE1-205ENST00000603651 KCNA4P22459 653 aa21.2■□□□□ 0.98
TUBE1-205ENST00000603651 HOXD11P31277 338 aaPredicted RBP21.2■□□□□ 0.98
TUBE1-205ENST00000603651 RNF216Q9NWF9 866 aaPredicted RBP21.2■□□□□ 0.98
TUBE1-205ENST00000603651 DCAF8L1A6NGE4 600 aa21.17■□□□□ 0.98
TUBE1-205ENST00000603651 NPM3O75607 178 aaKnown RBP21.11■□□□□ 0.97
TUBE1-205ENST00000603651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
TUBE1-205ENST00000603651 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
TUBE1-205ENST00000603651 RNF39Q9H2S5 420 aa20.26■□□□□ 0.83
TUBE1-205ENST00000603651 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
TUBE1-205ENST00000603651 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
TUBE1-205ENST00000603651 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
TUBE1-205ENST00000603651 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
TUBE1-205ENST00000603651 U3KPZ7 1027 aaPredicted RBP19.92■□□□□ 0.78
TUBE1-205ENST00000603651 FOXD4L1Q9NU39 408 aa19.58■□□□□ 0.72
TUBE1-205ENST00000603651 CAPN15O75808 1086 aa19.54■□□□□ 0.72
TUBE1-205ENST00000603651 SPINK5Q9NQ38 1064 aaPredicted RBP19.54■□□□□ 0.72
TUBE1-205ENST00000603651 MYCNP04198 464 aaPredicted RBP19.5■□□□□ 0.71
TUBE1-205ENST00000603651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
TUBE1-205ENST00000603651 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
TUBE1-205ENST00000603651 ZBTB22O15209 634 aa19.47■□□□□ 0.71
TUBE1-205ENST00000603651 SAMD1Q6SPF0 538 aaPredicted RBP19.41■□□□□ 0.7
TUBE1-205ENST00000603651 APLP2Q06481 763 aa19.39■□□□□ 0.69
TUBE1-205ENST00000603651 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
TUBE1-205ENST00000603651 ZNF219Q9P2Y4 722 aaPredicted RBP19.21■□□□□ 0.67
TUBE1-205ENST00000603651 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
TUBE1-205ENST00000603651 DSG3P32926 999 aa19.17■□□□□ 0.66
TUBE1-205ENST00000603651 ABCB7O75027 752 aa19.16■□□□□ 0.66
TUBE1-205ENST00000603651 ATF5Q9Y2D1 282 aaPredicted RBP19.07■□□□□ 0.64
TUBE1-205ENST00000603651 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
TUBE1-205ENST00000603651 POLA2Q14181 598 aa18.88■□□□□ 0.61
TUBE1-205ENST00000603651 ATXN8OSP0DMR3 200 aa18.83■□□□□ 0.6
TUBE1-205ENST00000603651 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
TUBE1-205ENST00000603651 FBLN2P98095 1184 aa18.3■□□□□ 0.52
TUBE1-205ENST00000603651 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
TUBE1-205ENST00000603651 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
TUBE1-205ENST00000603651 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
TUBE1-205ENST00000603651 AKT1S1Q96B36 256 aa17.96■□□□□ 0.47
TUBE1-205ENST00000603651 SPDYE2BA6NHP3 402 aa17.93■□□□□ 0.46
TUBE1-205ENST00000603651 SPDYE6P0CI01 402 aa17.93■□□□□ 0.46
TUBE1-205ENST00000603651 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
TUBE1-205ENST00000603651 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
TUBE1-205ENST00000603651 REM2Q8IYK8 340 aaPredicted RBP17.83■□□□□ 0.44
TUBE1-205ENST00000603651 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
TUBE1-205ENST00000603651 SSUH2Q9Y2M2 353 aa17.72■□□□□ 0.43
TUBE1-205ENST00000603651 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
TUBE1-205ENST00000603651 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
TUBE1-205ENST00000603651 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
TUBE1-205ENST00000603651 POTEHQ6S545 545 aa17.62■□□□□ 0.41
TUBE1-205ENST00000603651 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
TUBE1-205ENST00000603651 SPDYE1Q8NFV5 336 aaPredicted RBP17.53■□□□□ 0.4
TUBE1-205ENST00000603651 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
TUBE1-205ENST00000603651 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
TUBE1-205ENST00000603651 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
TUBE1-205ENST00000603651 FKBP8Q14318 412 aa17.31■□□□□ 0.36
TUBE1-205ENST00000603651 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
TUBE1-205ENST00000603651 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
TUBE1-205ENST00000603651 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
TUBE1-205ENST00000603651 PROM2Q8N271 834 aa17.1■□□□□ 0.33
TUBE1-205ENST00000603651 HAX1O00165 279 aa17.04■□□□□ 0.32
TUBE1-205ENST00000603651 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
TUBE1-205ENST00000603651 FARP1Q9Y4F1 1045 aaPredicted RBP16.9■□□□□ 0.3
TUBE1-205ENST00000603651 EVX2Q03828 476 aa16.81■□□□□ 0.28
TUBE1-205ENST00000603651 MIER1Q8N108 512 aa16.8■□□□□ 0.28
TUBE1-205ENST00000603651 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
TUBE1-205ENST00000603651 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
TUBE1-205ENST00000603651 SP7Q8TDD2 431 aaPredicted RBP16.74■□□□□ 0.27
TUBE1-205ENST00000603651 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
TUBE1-205ENST00000603651 CD44P16070 742 aaKnown RBP16.72■□□□□ 0.27
TUBE1-205ENST00000603651 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
TUBE1-205ENST00000603651 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
TUBE1-205ENST00000603651 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
TUBE1-205ENST00000603651 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
TUBE1-205ENST00000603651 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
TUBE1-205ENST00000603651 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-205ENST00000603651 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-205ENST00000603651 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
TUBE1-205ENST00000603651 GABBR2O75899 941 aa16.45■□□□□ 0.22
TUBE1-205ENST00000603651 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
TUBE1-205ENST00000603651 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
TUBE1-205ENST00000603651 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
TUBE1-205ENST00000603651 ZNF579Q8NAF0 562 aaKnown RBP16.39■□□□□ 0.21
TUBE1-205ENST00000603651 NUBP1P53384 320 aa16.31■□□□□ 0.2
TUBE1-205ENST00000603651 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms