RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 LHFPL6Q9Y693 200 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 ABCA6Q8N139 1617 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 CEP192Q8TEP8 1941 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 ZNF142P52746 1687 aaPredicted RBP3.2□□□□□ -1.9
PAF1-208ENST00000598594 A0A087WXM4 84 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 CXorf51AA0A1B0GTR3 108 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 F2Z2F3 143 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 CFAP126Q5VTH2 177 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.2□□□□□ -1.9
PAF1-208ENST00000598594 TIMM21Q9BVV7 248 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 ARFGEF1Q9Y6D6 1849 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 IQSEC2Q5JU85 1478 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 DIP2CQ9Y2E4 1556 aa3.2□□□□□ -1.9
PAF1-208ENST00000598594 URB2Q14146 1524 aaKnown RBP3.19□□□□□ -1.9
PAF1-208ENST00000598594 ESPL1Q14674 2120 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 IGKV3D-15A0A087WSY6 115 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 A0A087WWC5 75 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 TRAV12-3A0A0B4J271 114 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 TMEM30CPA0ZSE6 113 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 EFNA4P52798 201 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 NDPQ00604 133 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 MOBPQ13875 183 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 C9orf163Q8N9P6 203 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 SCRT1Q9BWW7 348 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 PRO1854Q9UHT4 67 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 C22orf24Q9Y442 160 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 LRRC9Q6ZRR7 1453 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 CACNA1DQ01668 2161 aa3.19□□□□□ -1.9
PAF1-208ENST00000598594 ITSN2Q9NZM3 1697 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 ADAMTS7Q9UKP4 1686 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 PLXNC1O60486 1568 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 UMAD1C9J7I0 102 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 ACYP1P07311 99 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 SMIM11AP58511 58 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 UBE2D3P61077 147 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 UBE2D2P62837 147 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 VMO1Q7Z5L0 202 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 Q8N6K4 173 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 IFI27L1Q96BM0 104 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 FAM167A-AS1Q96KT0 104 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 LINC01600Q96MT4 127 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 R4GN34 69 aa3.18□□□□□ -1.9
PAF1-208ENST00000598594 XRN1Q8IZH2 1706 aaKnown RBP3.18□□□□□ -1.9
PAF1-208ENST00000598594 SIP14410 1827 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 NRXN2Q9P2S2 1712 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 TEX49A0A1B0GTD5 131 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 A0A1W2PNM2 257 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 C2orf70A6NJV1 201 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 SMIM13P0DJ93 91 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 KLKP1Q107X0 134 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 C10orf128Q5T292 105 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 TMEM170BQ5T4T1 132 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 KRTAP26-1Q6PEX3 210 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 FAM223AQ8IWN6 122 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 MAPK1IP1LQ8NDC0 245 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 LINC00167Q96N53 147 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 GFRA4Q9GZZ7 299 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 SPTBP11277 2137 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 CFAP43Q8NDM7 1665 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 PREX1Q8TCU6 1659 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 ANKRD36A6QL64 1941 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 RP1P56715 2156 aa3.17□□□□□ -1.9
PAF1-208ENST00000598594 PLA2R1Q13018 1463 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 TRAV22A0A0B4J277 110 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 BCE1O60756 84 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 IGFBP7Q16270 282 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 LINC00643Q86TS7 51 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 BPESC1Q9GZL8 116 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 PLCH1Q4KWH8 1693 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 FANCD2Q9BXW9 1451 aa3.16□□□□□ -1.9
PAF1-208ENST00000598594 TRAV23DV6A0A075B6W5 121 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 EDDM3BP56851 147 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 ELOBQ15370 118 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 CSAG1Q6PB30 78 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 SFTA2Q6UW10 78 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 ZNF818PQ6ZRF7 136 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 LYPD1Q8N2G4 141 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 Q9BRP9 147 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 LOC285556D6RIA3 1793 aa3.15□□□□□ -1.91
PAF1-208ENST00000598594 SHROOM3Q8TF72 1996 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 COL4A5P29400 1685 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 TOP2AP11388 1531 aaKnown RBP3.14□□□□□ -1.91
PAF1-208ENST00000598594 HMGXB3Q12766 1538 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 TRBV10-1A0A0K0K1A3 114 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
PAF1-208ENST00000598594 CHKB-CPT1BH3BT56 60 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 SFTA3P0C7M3 94 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 ZNF56Q15929 161 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 Q5VV11 94 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 NDUFA11Q86Y39 141 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 KIF25-AS1Q9Y6Z4 181 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 SCN7AQ01118 1682 aa3.14□□□□□ -1.91
PAF1-208ENST00000598594 RNF17Q9BXT8 1623 aaKnown RBP3.13□□□□□ -1.91
PAF1-208ENST00000598594 BAZ2BQ9UIF8 2168 aaKnown RBP3.13□□□□□ -1.91
PAF1-208ENST00000598594 SDHAF1A6NFY7 115 aa3.13□□□□□ -1.91
PAF1-208ENST00000598594 IGKV3-20P01619 116 aa3.13□□□□□ -1.91
PAF1-208ENST00000598594 COX6CP09669 75 aa3.13□□□□□ -1.91
PAF1-208ENST00000598594 HOXB6P17509 224 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms