RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 NOP10Q9NPE3 64 aaKnown RBP4.1□□□□□ -1.75
VPS25-204ENST00000589577 TMEM242Q9NWH2 141 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 LPAP08519 4548 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 TRAV9-1A0A075B6T8 112 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 IGKV3D-20A0A0C4DH25 116 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 IGHV3-16A0A0C4DH30 117 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 A8MWV9 139 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 RHODO00212 210 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 GNRH2O43555 120 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 ATP6V1G1O75348 118 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 AZU1P20160 251 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 CRIP1P50238 77 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 DAZ2Q13117 558 aaKnown RBP4.09□□□□□ -1.75
VPS25-204ENST00000589577 TWIST1Q15672 202 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 COX19Q49B96 90 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 PIK3CD-AS1Q5SR53 167 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 DNLZQ5SXM8 178 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 ATP5L2Q7Z4Y8 100 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.09□□□□□ -1.75
VPS25-204ENST00000589577 PGLYRP4Q96LB8 373 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 IMMP2LQ96T52 175 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 V9GYV3 84 aa4.09□□□□□ -1.75
VPS25-204ENST00000589577 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 GAGE12BA1L429 117 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 LRCOL1A6NCL2 159 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 H7C1H1 209 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 SNAI2O43623 268 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 GAGE7O76087 117 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 GAGE12FP0CL80 117 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 GAGE12GP0CL81 117 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 GAGE12IP0CL82 117 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 GZMBP10144 247 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 CTRLP40313 264 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 RAB4BP61018 213 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 SSTP61278 116 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 HBBP68871 147 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 SLAQ13239 276 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 ODF1Q14990 250 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
VPS25-204ENST00000589577 WDR73Q6P4I2 378 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 LYZL1Q6UWQ5 148 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 SCXQ7RTU7 201 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 OR4C5Q8NGB2 326 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 C9orf85Q96MD7 179 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 SMCO4Q9NRQ5 59 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 MRPL16Q9NX20 251 aaKnown RBP4.08□□□□□ -1.76
VPS25-204ENST00000589577 C11orf21Q9P2W6 132 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
VPS25-204ENST00000589577 TRAV4A0A0B4J268 109 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 TRGV4A0A0C4DH28 118 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 A0A0J9YY99 117 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 SMIM27A0A1W2PRY6 76 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 F5H697 171 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 SIVA1O15304 175 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 MGPP08493 103 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 IGLC6P0CF74 106 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 RNASE3P12724 160 aaKnown RBP4.07□□□□□ -1.76
VPS25-204ENST00000589577 HOXA5P20719 270 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 ZNF56Q15929 161 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 FAM74A4Q5TZK3 123 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 MRPL54Q6P161 138 aaKnown RBP4.07□□□□□ -1.76
VPS25-204ENST00000589577 RASL11AQ6T310 242 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 Q6ZQT7 251 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 NFE4Q86UQ8 179 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 C11orf72Q8NBR9 251 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 OR10AG1Q8NH19 301 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 NTN5Q8WTR8 489 aaPredicted RBP4.07□□□□□ -1.76
VPS25-204ENST00000589577 RASL10AQ92737 203 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 PTH2Q96A98 100 aa4.07□□□□□ -1.76
VPS25-204ENST00000589577 MUC21A0A0G2JKD1 596 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 MUC21A0A140T8X8 626 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 SPINK4O60575 86 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 PPP1R17O96001 155 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 HLA-DQA1P01909 254 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 MT-ND6P03923 174 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 NTF3P20783 257 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 CAMPP49913 170 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 FOXA3P55318 350 aaPredicted RBP4.06□□□□□ -1.76
VPS25-204ENST00000589577 Q6ZTI0 123 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 NUP35Q8NFH5 326 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 PRADC1Q9BSG0 188 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 SSBP4Q9BWG4 385 aaPredicted RBP4.06□□□□□ -1.76
VPS25-204ENST00000589577 CNFNQ9BYD5 112 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 DPH3P1Q9H4G8 78 aa4.06□□□□□ -1.76
VPS25-204ENST00000589577 A0A096LPF7 62 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 H3BNG1 76 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 RS1O15537 224 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 NXPH4O95158 308 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 IGHV3-53P01767 116 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 RHOHQ15669 191 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 ZFP2Q6ZN57 461 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 Q8N814 137 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 GTSF1Q8WW33 167 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 TMEM191AQ9H0A3 160 aa4.05□□□□□ -1.76
VPS25-204ENST00000589577 A0A087WWL8 130 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 PPBPP02775 128 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 RPL36AP83881 106 aaKnown RBP4.04□□□□□ -1.76
VPS25-204ENST00000589577 CFAP126Q5VTH2 177 aa4.04□□□□□ -1.76
VPS25-204ENST00000589577 SH2D6Q7Z4S9 175 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms