RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 ALKAL2Q6UX46 152 aa6.49□□□□□ -1.37
TOP3A-211ENST00000581536 DAZ4Q86SG3 579 aaKnown RBP6.49□□□□□ -1.37
TOP3A-211ENST00000581536 DNAJC30Q96LL9 226 aa6.49□□□□□ -1.37
TOP3A-211ENST00000581536 DAZ3Q9NR90 486 aaKnown RBP6.49□□□□□ -1.37
TOP3A-211ENST00000581536 MED9Q9NWA0 146 aa6.49□□□□□ -1.37
TOP3A-211ENST00000581536 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 C19orf71A6NCJ1 209 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 TEX46H3BTG2 121 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 K7EP13 123 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 RHODO00212 210 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 VAX2Q9UIW0 290 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
TOP3A-211ENST00000581536 CXCL1P09341 107 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 OR5AL1P0C617 328 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 BCL2P10415 239 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 GNG4P50150 75 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 ERVFC1-1P60608 527 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 RAB4BP61018 213 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 C10orf126Q8N4M7 172 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 NEXN-AS1Q8NBZ9 246 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 OR2D3Q8NGH3 330 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 OCC1Q8TAD7 63 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 DAZAP1Q96EP5 407 aaKnown RBP6.47□□□□□ -1.37
TOP3A-211ENST00000581536 TPPP3Q9BW30 176 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
TOP3A-211ENST00000581536 TRBV7-3A0A075B6L6 115 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 F5H697 171 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 PDE6DO43924 150 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 ATP6V1G1O75348 118 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 IFNA1P01562 189 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 IGLC6P0CF74 106 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 UBE2D3P61077 147 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 UBE2D2P62837 147 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 ZNF56Q15929 161 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
TOP3A-211ENST00000581536 K7EN84 100 aa6.45□□□□□ -1.38
TOP3A-211ENST00000581536 PSCAO43653 123 aa6.45□□□□□ -1.38
TOP3A-211ENST00000581536 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
TOP3A-211ENST00000581536 WFDC2Q14508 124 aa6.45□□□□□ -1.38
TOP3A-211ENST00000581536 LYZL1Q6UWQ5 148 aa6.45□□□□□ -1.38
TOP3A-211ENST00000581536 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
TOP3A-211ENST00000581536 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
TOP3A-211ENST00000581536 FAT1Q14517 4588 aa6.45□□□□□ -1.38
TOP3A-211ENST00000581536 A0A087WWC5 75 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 XGP55808 180 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 NTM-AS1Q6ZSK4 140 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 NIT1Q86X76 327 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 FER1L6-AS1Q8NA97 138 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 OR10G8Q8NGN5 311 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 LYPD6BQ8NI32 183 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 DEFB104AQ8WTQ1 72 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 RNASE7Q9H1E1 156 aaKnown RBP6.44□□□□□ -1.38
TOP3A-211ENST00000581536 KLK12Q9UKR0 248 aa6.44□□□□□ -1.38
TOP3A-211ENST00000581536 TMEM262E9PQX1 116 aa6.43□□□□□ -1.38
TOP3A-211ENST00000581536 LECT2O14960 151 aa6.43□□□□□ -1.38
TOP3A-211ENST00000581536 P01737 135 aa6.43□□□□□ -1.38
TOP3A-211ENST00000581536 NTF3P20783 257 aa6.43□□□□□ -1.38
TOP3A-211ENST00000581536 RPS20P60866 119 aaKnown RBP6.43□□□□□ -1.38
TOP3A-211ENST00000581536 BLOC1S1P78537 153 aa6.43□□□□□ -1.38
TOP3A-211ENST00000581536 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 M0QY20 66 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 MGPP08493 103 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 SMIM17P0DL12 118 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 GCSHP23434 173 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 HAMPP81172 84 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 TOR2AQ5JU69 321 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 Q8N814 137 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 BAALCQ8WXS3 180 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 SMIM12Q96EX1 92 aa6.42□□□□□ -1.38
TOP3A-211ENST00000581536 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 CEBPGP53567 150 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 FOXA3P55318 350 aaPredicted RBP6.41□□□□□ -1.38
TOP3A-211ENST00000581536 CACNG7P62955 275 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 LAGE3Q14657 143 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 NDUFA5Q16718 116 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 SUMO4Q6EEV6 95 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 ENHOQ6UWT2 76 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 Q8N1X5 172 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 GTSF1Q8WW33 167 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 URGCP-MRPS24S4R325 110 aa6.41□□□□□ -1.38
TOP3A-211ENST00000581536 IGKV2D-24A0A075B6R9 120 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 A0A087WX48 190 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 IGLV5-52A0A0A0MRZ9 124 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 F2Z2F3 143 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 TAGLN2P37802 199 aaKnown RBP6.4□□□□□ -1.38
TOP3A-211ENST00000581536 TWIST1Q15672 202 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 MPV17L2Q567V2 206 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 ATRAIDQ6UW56 229 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 UBE2WQ96B02 151 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 AP1S3Q96PC3 154 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 TM2D2Q9BX73 214 aa6.4□□□□□ -1.38
TOP3A-211ENST00000581536 EIF5A2Q9GZV4 153 aaKnown RBP6.4□□□□□ -1.38
TOP3A-211ENST00000581536 RPP21Q9H633 154 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms