RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 ISOC2Q96AB3 205 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 DNAJC30Q96LL9 226 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 DPH3P1Q9H4G8 78 aa8.51□□□□□ -1.05
SNORD55-201ENST00000581525 HERC2O95714 4834 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 ZNF56Q15929 161 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 FRZBQ92765 325 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 CHCHD7Q9BUK0 85 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 TPPP3Q9BW30 176 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 NAT8Q9UHE5 227 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 V9GYV3 84 aa8.5□□□□□ -1.05
SNORD55-201ENST00000581525 TRBV6-8A0A0A6YYG3 113 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 H7C1H1 209 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 SSTP61278 116 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 IFITM2Q01629 132 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 LAGE3Q14657 143 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
SNORD55-201ENST00000581525 NIT1Q86X76 327 aa8.49□□□□□ -1.05
SNORD55-201ENST00000581525 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
SNORD55-201ENST00000581525 F5H697 171 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 TWIST1Q15672 202 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 TMEM97Q5BJF2 176 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 NTM-AS1Q6ZSK4 140 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 NIT2Q9NQR4 276 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
SNORD55-201ENST00000581525 RASL11AQ6T310 242 aa8.47□□□□□ -1.05
SNORD55-201ENST00000581525 C15orf54Q8N8G6 183 aa8.47□□□□□ -1.05
SNORD55-201ENST00000581525 A0A1B0GUT8 65 aa8.46□□□□□ -1.06
SNORD55-201ENST00000581525 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
SNORD55-201ENST00000581525 RAB14P61106 215 aa8.46□□□□□ -1.06
SNORD55-201ENST00000581525 GATD1Q8NB37 220 aa8.46□□□□□ -1.06
SNORD55-201ENST00000581525 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.06
SNORD55-201ENST00000581525 SMIM27A0A1W2PRY6 76 aa8.45□□□□□ -1.06
SNORD55-201ENST00000581525 IQCJQ1A5X6 159 aa8.45□□□□□ -1.06
SNORD55-201ENST00000581525 Q8N3U1 123 aa8.45□□□□□ -1.06
SNORD55-201ENST00000581525 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.45□□□□□ -1.06
SNORD55-201ENST00000581525 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
SNORD55-201ENST00000581525 TMEM191AQ9H0A3 160 aa8.45□□□□□ -1.06
SNORD55-201ENST00000581525 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
SNORD55-201ENST00000581525 RYR1P21817 5038 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 IGHV3-30P01768 117 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 MGPP08493 103 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 IGHV3-30-3P0DP02 117 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 IGHV3-30-5P0DP03 117 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
SNORD55-201ENST00000581525 A0A087WTM6 91 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 TRAV8-3A0A0A6YYJ7 113 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 LRCOL1A6NCL2 159 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 PKIAP61925 76 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 ADIRFQ15847 76 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 ATRAIDQ6UW56 229 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 NAT8BQ9UHF3 227 aa8.43□□□□□ -1.06
SNORD55-201ENST00000581525 HSPG2P98160 4391 aa8.42□□□□□ -1.06
SNORD55-201ENST00000581525 ELOBQ15370 118 aa8.42□□□□□ -1.06
SNORD55-201ENST00000581525 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
SNORD55-201ENST00000581525 RAB4AP20338 218 aa8.41□□□□□ -1.06
SNORD55-201ENST00000581525 PNRC1Q12796 327 aaPredicted RBP8.41□□□□□ -1.06
SNORD55-201ENST00000581525 RIGQ13278 110 aa8.41□□□□□ -1.06
SNORD55-201ENST00000581525 BORCS7Q96B45 105 aa8.41□□□□□ -1.06
SNORD55-201ENST00000581525 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
SNORD55-201ENST00000581525 COX11Q9Y6N1 276 aa8.41□□□□□ -1.06
SNORD55-201ENST00000581525 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 A0A087WX48 190 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 A0A1B0GUV1 79 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 A0A1B0GW15 77 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 Q0VG73 95 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 SPATA12Q7Z6I5 190 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 PRR34Q9NV39 138 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 URGCP-MRPS24S4R325 110 aa8.4□□□□□ -1.06
SNORD55-201ENST00000581525 DNAH8Q96JB1 4490 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 TRAV26-2A0A0B4J265 109 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 EREGO14944 169 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 NCR2O95944 276 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
SNORD55-201ENST00000581525 MPV17L2Q567V2 206 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 ENHOQ6UWT2 76 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
SNORD55-201ENST00000581525 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 TMEM262E9PQX1 116 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 PPP1R2P9O14990 202 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 RBX1P62877 108 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 MAPKAPK5-AS1Q8N8E1 139 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 RPL39LQ96EH5 51 aaKnown RBP8.38□□□□□ -1.07
SNORD55-201ENST00000581525 CHCHD5Q9BSY4 110 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 Q9HAA7 133 aa8.38□□□□□ -1.07
SNORD55-201ENST00000581525 SDHAF1A6NFY7 115 aa8.37□□□□□ -1.07
SNORD55-201ENST00000581525 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms