RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PATJQ8NI35 1801 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 ABCA9Q8IUA7 1624 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 TRAV22A0A0B4J277 110 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 EFNA4P52798 201 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 EDDM3BP56851 147 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 TIAM1Q13009 1591 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 TANC1Q9C0D5 1861 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 CDK13Q14004 1512 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 TUBGCP6Q96RT7 1819 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 KIAA1549Q9HCM3 1950 aa2.98□□□□□ -1.93
TOPBP1-210ENST00000572787 UMAD1C9J7I0 102 aa2.97□□□□□ -1.93
TOPBP1-210ENST00000572787 UBE2D1P51668 147 aa2.97□□□□□ -1.93
TOPBP1-210ENST00000572787 CNBPP62633 177 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-210ENST00000572787 ELOBQ15370 118 aa2.97□□□□□ -1.93
TOPBP1-210ENST00000572787 LAMB2P55268 1798 aa2.97□□□□□ -1.93
TOPBP1-210ENST00000572787 MYO16Q9Y6X6 1858 aa2.96□□□□□ -1.93
TOPBP1-210ENST00000572787 EML5Q05BV3 1969 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 NACAE9PAV3 2078 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 DOCK9Q9BZ29 2069 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 TRBV25-1A0A075B6N4 114 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 TEX49A0A1B0GTD5 131 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 SDHAF1A6NFY7 115 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 KRTAP29-1A8MX34 341 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 TFF1P04155 84 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 HOXB6P17509 224 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 MRGPRG-AS1Q2M3A8 158 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 Q5VV11 94 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 DYNLRB1Q9NP97 96 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 ORMDL1Q9P0S3 153 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 URB2Q14146 1524 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 TOP2BQ02880 1626 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 TRPM7Q96QT4 1865 aa2.96□□□□□ -1.94
TOPBP1-210ENST00000572787 LAMB4A4D0S4 1761 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 RGPD8O14715 1765 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 RGPD5Q99666 1765 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 SLIT2O94813 1529 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 NUPR2A6NF83 97 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 TMEM14DPA8MWL7 114 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 CHKB-CPT1BH3BT56 60 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 IGKV3-15P01624 115 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 CTSGP08311 255 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 CSAG1Q6PB30 78 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 FAM223AQ8IWN6 122 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 LTBP2Q14767 1821 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 DIP2CQ9Y2E4 1556 aa2.95□□□□□ -1.94
TOPBP1-210ENST00000572787 PLXNA1Q9UIW2 1896 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 SNRNP200O75643 2136 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 HRES1P13985 223 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 ELOF1P60002 83 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 ZNF56Q15929 161 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 PYDC2Q56P42 97 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 XAF1Q6GPH4 301 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 ABCA7Q8IZY2 2146 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 TVP23CQ96ET8 276 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 BPESC1Q9GZL8 116 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 MRPL36Q9P0J6 103 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 FANCD2Q9BXW9 1451 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 RGPD2P0DJD1 1756 aa2.94□□□□□ -1.94
TOPBP1-210ENST00000572787 COL11A1P12107 1806 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 PCNX2A6NKB5 2137 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 COL4A6Q14031 1691 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 ADAMTS7Q9UKP4 1686 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 A0A0J9YY99 117 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 LOC285095A0A1B0GVY8 99 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 RTL8CO15255 209 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 HMGN2P05204 90 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 SFTA3P0C7M3 94 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 VOPP1Q96AW1 172 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 CDC42SE2Q9NRR3 84 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 CCL26Q9Y258 94 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 UBR1Q8IWV7 1749 aa2.93□□□□□ -1.94
TOPBP1-210ENST00000572787 STRCP1A6NGW2 1772 aa2.92□□□□□ -1.94
TOPBP1-210ENST00000572787 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
TOPBP1-210ENST00000572787 KRTAP10-9P60411 292 aa2.92□□□□□ -1.94
TOPBP1-210ENST00000572787 PATE1Q8WXA2 126 aa2.92□□□□□ -1.94
TOPBP1-210ENST00000572787 LENEPQ9Y5L5 61 aa2.92□□□□□ -1.94
TOPBP1-210ENST00000572787 MYO18AQ92614 2054 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 ZNF815PA8K554 130 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 DEFB134Q4QY38 66 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 DEFB121Q5J5C9 76 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 PSMG4Q5JS54 123 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 NDUFA4L2Q9NRX3 87 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 HMGXB3Q12766 1538 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 NEXMIFQ5QGS0 1516 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 KDM3BQ7LBC6 1761 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 DOCK2Q92608 1830 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 PLXNC1O60486 1568 aa2.91□□□□□ -1.94
TOPBP1-210ENST00000572787 RGPD1P0DJD0 1748 aa2.9□□□□□ -1.94
TOPBP1-210ENST00000572787 C1orf167Q5SNV9 1468 aa2.9□□□□□ -1.94
TOPBP1-210ENST00000572787 ZNF318Q5VUA4 2279 aa2.9□□□□□ -1.94
TOPBP1-210ENST00000572787 ZNF142P52746 1687 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 IGLV4-60A0A075B6I1 120 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 TRBV6-7A0A0A0MS04 114 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 IGHV3-30P01768 117 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 IGHV3-30-5P0DP03 117 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 C20orf197Q8N268 126 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 Q8N9L7 120 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 TMEM14BQ9NUH8 114 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms