RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 NTF3P20783 257 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 ATRAIDQ6UW56 229 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 DAZ4Q86SG3 579 aaKnown RBP6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 OR10G8Q8NGN5 311 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 DNAJC30Q96LL9 226 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 DAZ3Q9NR90 486 aaKnown RBP6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 A0A087WTM6 91 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 F5H697 171 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 RPL36AP83881 106 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 CLRN3Q8NCR9 226 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 GTSF1Q8WW33 167 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 RPL36ALQ969Q0 106 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 RPP21Q9H633 154 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 Q9HAA7 133 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
GTF3C1-213ENST00000571886 MGPP08493 103 aa6.84□□□□□ -1.31
GTF3C1-213ENST00000571886 CACNG7P62955 275 aa6.84□□□□□ -1.31
GTF3C1-213ENST00000571886 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
GTF3C1-213ENST00000571886 NTM-AS1Q6ZSK4 140 aa6.84□□□□□ -1.31
GTF3C1-213ENST00000571886 AP1S3Q96PC3 154 aa6.84□□□□□ -1.31
GTF3C1-213ENST00000571886 DNAH5Q8TE73 4624 aa6.84□□□□□ -1.31
GTF3C1-213ENST00000571886 A0A087WWC5 75 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 XKRY2A2RUG3 117 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 LRCOL1A6NCL2 159 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 F2Z2F3 143 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 M0QY20 66 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 NDUFS6O75380 124 aaKnown RBP6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 SMIM17P0DL12 118 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 ADCYAP1P18509 176 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 CTRLP40313 264 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 NIT1Q86X76 327 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 SMCO4Q9NRQ5 59 aa6.83□□□□□ -1.32
GTF3C1-213ENST00000571886 TRBV6-8A0A0A6YYG3 113 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 WFDC2Q14508 124 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 FAM74A3Q4VXF1 159 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 WDR73Q6P4I2 378 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 FAM231DQ6ZW35 169 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 DEFB104AQ8WTQ1 72 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
GTF3C1-213ENST00000571886 TWIST1Q15672 202 aa6.81□□□□□ -1.32
GTF3C1-213ENST00000571886 PGLYRP4Q96LB8 373 aa6.81□□□□□ -1.32
GTF3C1-213ENST00000571886 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
GTF3C1-213ENST00000571886 DPH3P1Q9H4G8 78 aa6.81□□□□□ -1.32
GTF3C1-213ENST00000571886 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
GTF3C1-213ENST00000571886 ABCA13Q86UQ4 5058 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 HSPG2P98160 4391 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 TMEM262E9PQX1 116 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 TRGC1P0CF51 173 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
GTF3C1-213ENST00000571886 COLCA2A8K830 154 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 A8MWL6 223 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 PSCAO43653 123 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 LAGE3Q14657 143 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 MPV17L2Q567V2 206 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 RASL11AQ6T310 242 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 GATD1Q8NB37 220 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 OSTCQ9NRP0 149 aa6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-213ENST00000571886 EREGO14944 169 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 LECT2O14960 151 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 GAS8-AS1O95177 125 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 MT-ND4LP03901 98 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 GAGE6Q13070 117 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 RHEBQ15382 184 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 TMEM241Q24JQ0 296 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 Q8N976 141 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 ISOC2Q96AB3 205 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 UBE2WQ96B02 151 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 NIT2Q9NQR4 276 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 URGCP-MRPS24S4R325 110 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 V9GYV3 84 aa6.78□□□□□ -1.32
GTF3C1-213ENST00000571886 A0A087WX48 190 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 C7orf77A4D0Y5 90 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 CT83Q5H943 113 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 Q8N814 137 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 TSKUQ8WUA8 353 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 CHCHD5Q9BSY4 110 aa6.77□□□□□ -1.33
GTF3C1-213ENST00000571886 HIGD1CA8MV81 97 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms