RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TIRAPP58753 221 aa9.2□□□□□ -0.94
VPS9D1-204ENST00000565023 ISOC2Q96AB3 205 aa9.2□□□□□ -0.94
VPS9D1-204ENST00000565023 KIF25-AS1Q9Y6Z4 181 aa9.2□□□□□ -0.94
VPS9D1-204ENST00000565023 PSCAO43653 123 aa9.19□□□□□ -0.94
VPS9D1-204ENST00000565023 LINC00694P0DN24 101 aa9.19□□□□□ -0.94
VPS9D1-204ENST00000565023 Q8N3U1 123 aa9.19□□□□□ -0.94
VPS9D1-204ENST00000565023 C10orf126Q8N4M7 172 aa9.19□□□□□ -0.94
VPS9D1-204ENST00000565023 AP1S3Q96PC3 154 aa9.19□□□□□ -0.94
VPS9D1-204ENST00000565023 A0A087WTM6 91 aa9.18□□□□□ -0.94
VPS9D1-204ENST00000565023 NTF3P20783 257 aa9.18□□□□□ -0.94
VPS9D1-204ENST00000565023 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
VPS9D1-204ENST00000565023 RAB4BP61018 213 aa9.18□□□□□ -0.94
VPS9D1-204ENST00000565023 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
VPS9D1-204ENST00000565023 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
VPS9D1-204ENST00000565023 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 ADIRFQ15847 76 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 ZNF56Q15929 161 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 C15orf54Q8N8G6 183 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 TSKUQ8WUA8 353 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 GFRA4Q9GZZ7 299 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 V9GYV3 84 aa9.17□□□□□ -0.94
VPS9D1-204ENST00000565023 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
VPS9D1-204ENST00000565023 K7EP13 123 aa9.16□□□□□ -0.94
VPS9D1-204ENST00000565023 TRGC1P0CF51 173 aa9.16□□□□□ -0.94
VPS9D1-204ENST00000565023 IBA57-AS1B1ANH7 110 aa9.15□□□□□ -0.94
VPS9D1-204ENST00000565023 CDK2AP2O75956 126 aa9.15□□□□□ -0.94
VPS9D1-204ENST00000565023 TWIST1Q15672 202 aa9.15□□□□□ -0.94
VPS9D1-204ENST00000565023 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
VPS9D1-204ENST00000565023 DNAH5Q8TE73 4624 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 HIGD1CA8MV81 97 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 F5H697 171 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 UQCC3Q6UW78 93 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 PGLYRP4Q96LB8 373 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
VPS9D1-204ENST00000565023 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
VPS9D1-204ENST00000565023 UBE2D3P61077 147 aa9.13□□□□□ -0.95
VPS9D1-204ENST00000565023 UBE2D2P62837 147 aa9.13□□□□□ -0.95
VPS9D1-204ENST00000565023 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
VPS9D1-204ENST00000565023 NEXN-AS1Q8NBZ9 246 aa9.13□□□□□ -0.95
VPS9D1-204ENST00000565023 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
VPS9D1-204ENST00000565023 A0A1B0GUT8 65 aa9.12□□□□□ -0.95
VPS9D1-204ENST00000565023 M0QY20 66 aa9.12□□□□□ -0.95
VPS9D1-204ENST00000565023 MGPP08493 103 aa9.12□□□□□ -0.95
VPS9D1-204ENST00000565023 URGCP-MRPS24S4R325 110 aa9.12□□□□□ -0.95
VPS9D1-204ENST00000565023 A0A087WWC5 75 aa9.11□□□□□ -0.95
VPS9D1-204ENST00000565023 SMIM27A0A1W2PRY6 76 aa9.11□□□□□ -0.95
VPS9D1-204ENST00000565023 PNRC1Q12796 327 aaPredicted RBP9.11□□□□□ -0.95
VPS9D1-204ENST00000565023 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
VPS9D1-204ENST00000565023 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
VPS9D1-204ENST00000565023 BORCS7Q96B45 105 aa9.11□□□□□ -0.95
VPS9D1-204ENST00000565023 LINC00862A6NCI5 91 aa9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 H7C1H1 209 aa9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 KRTAP10-1P60331 282 aa9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 CDPF1Q6NVV7 123 aa9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 NAT8BQ9UHF3 227 aa9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
VPS9D1-204ENST00000565023 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 TMEM218A2RU14 115 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 LRCOL1A6NCL2 159 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 LECT2O14960 151 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 NIT1Q86X76 327 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 DNAJC30Q96LL9 226 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
VPS9D1-204ENST00000565023 UBR4Q5T4S7 5183 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 A0A087WX48 190 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 TMEM262E9PQX1 116 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 PPP1R2P9O14990 202 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 ADCYAP1P18509 176 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 GCSHP23434 173 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 RIGQ13278 110 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 LAGE3Q14657 143 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 KCNIP4Q6PIL6 250 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 COMMD7Q86VX2 200 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 UBE2WQ96B02 151 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 TMEM191AQ9H0A3 160 aa9.08□□□□□ -0.96
VPS9D1-204ENST00000565023 IGKV2D-24A0A075B6R9 120 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 TRAV8-3A0A0A6YYJ7 113 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 HAMPP81172 84 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 WFDC2Q14508 124 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 Q8N1X5 172 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 Q8N814 137 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 FRZBQ92765 325 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 NIT2Q9NQR4 276 aa9.07□□□□□ -0.96
VPS9D1-204ENST00000565023 F8W036 122 aa9.06□□□□□ -0.96
VPS9D1-204ENST00000565023 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.06□□□□□ -0.96
VPS9D1-204ENST00000565023 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
VPS9D1-204ENST00000565023 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
VPS9D1-204ENST00000565023 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
VPS9D1-204ENST00000565023 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
VPS9D1-204ENST00000565023 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
VPS9D1-204ENST00000565023 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms