RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 Q6ZTI0 123 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 IGHV4-31P0DP07 118 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 CEMP1Q6PRD7 247 aaPredicted RBP8.55□□□□□ -1.04
RPAP1-204ENST00000562303 FRMPD3Q5JV73 1810 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 Q6ZUT4 128 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 PRORYQ9H606 182 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 SIP14410 1827 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 B5MCH6 92 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 E9PLD3 99 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 C20orf203Q8NBC4 194 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 IGKV2D-26A0A0A0MRZ7 120 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 LYRM9A8MSI8 78 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 E7EUB6 86 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 ODF3L1Q8IXM7 274 aa8.55□□□□□ -1.04
RPAP1-204ENST00000562303 A0A1W2PNU3 283 aaPredicted RBP8.54□□□□□ -1.04
RPAP1-204ENST00000562303 CTRLP40313 264 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 Q8NA96 180 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 PLXND1Q9Y4D7 1925 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 HELZP42694 1942 aaKnown RBP8.54□□□□□ -1.04
RPAP1-204ENST00000562303 FAM236AA0A1B0GUQ0 79 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 FAM236BA0A1B0GV22 79 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 Q6YL49 198 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 P0DMU3 169 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
RPAP1-204ENST00000562303 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 ZGRF1Q86YA3 2104 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.53□□□□□ -1.04
RPAP1-204ENST00000562303 FXYD2P54710 66 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 MGAMO43451 1857 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
RPAP1-204ENST00000562303 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 NACAE9PAV3 2078 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
RPAP1-204ENST00000562303 PDE6GP18545 87 aa8.52□□□□□ -1.04
RPAP1-204ENST00000562303 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.04
RPAP1-204ENST00000562303 CCDC140Q96MF4 163 aa8.52□□□□□ -1.05
RPAP1-204ENST00000562303 NDUFC2O95298 119 aa8.52□□□□□ -1.05
RPAP1-204ENST00000562303 LMO4P61968 165 aa8.52□□□□□ -1.05
RPAP1-204ENST00000562303 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
RPAP1-204ENST00000562303 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
RPAP1-204ENST00000562303 BPY2O14599 106 aa8.52□□□□□ -1.05
RPAP1-204ENST00000562303 NCKAP5O14513 1909 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 MYLKQ15746 1914 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 IGKV1D-37A0A075B6S9 117 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 LINC01548A6NM66 108 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 CRYGBP07316 175 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 Q6ZSR3 168 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
RPAP1-204ENST00000562303 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 NUPR1O60356 82 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 WISP2O76076 250 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 FAM208BQ5VWN6 2430 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 DEFB114Q30KQ6 69 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
RPAP1-204ENST00000562303 MSMPQ1L6U9 139 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 MED13Q9UHV7 2174 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 PLXNA2O75051 1894 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
RPAP1-204ENST00000562303 UBE2D1P51668 147 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 SVIPQ8NHG7 77 aa8.5□□□□□ -1.05
RPAP1-204ENST00000562303 KIR2DL5BA0A0G2JN68 375 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 KIR2DL5BA0A0G2JPC4 375 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 KIR2DL5AQ8N109 375 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 SPRY4Q9C004 299 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 MIAQ16674 131 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 IGLV2-18A0A075B6J9 118 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 H3BT86 120 aa8.49□□□□□ -1.05
RPAP1-204ENST00000562303 PTPRQQ9UMZ3 2332 aa8.48□□□□□ -1.05
RPAP1-204ENST00000562303 M0R2N4 97 aa8.48□□□□□ -1.05
RPAP1-204ENST00000562303 WFDC2Q14508 124 aa8.48□□□□□ -1.05
RPAP1-204ENST00000562303 ODF1Q14990 250 aa8.48□□□□□ -1.05
RPAP1-204ENST00000562303 RLFQ13129 1914 aa8.48□□□□□ -1.05
RPAP1-204ENST00000562303 MIFP14174 115 aa8.48□□□□□ -1.05
RPAP1-204ENST00000562303 LY6G6DO95868 133 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 TSC2P49815 1807 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 IGLV2-14P01704 120 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 Q6ZSV7 163 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 LINC00467Q9BRT7 94 aa8.47□□□□□ -1.05
RPAP1-204ENST00000562303 K7EQG2 157 aa8.46□□□□□ -1.05
RPAP1-204ENST00000562303 FOXI1Q12951 378 aa8.46□□□□□ -1.05
RPAP1-204ENST00000562303 TANC1Q9C0D5 1861 aa8.46□□□□□ -1.05
RPAP1-204ENST00000562303 IGF1P05019 195 aa8.46□□□□□ -1.05
RPAP1-204ENST00000562303 TNCP24821 2201 aa8.46□□□□□ -1.06
RPAP1-204ENST00000562303 ZNF80P51504 273 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms