RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 ADIRFQ15847 76 aa13.81□□□□□ -0.2
TPM1-232ENST00000561425 SLC7A5P1Q8MH63 180 aa13.81□□□□□ -0.2
TPM1-232ENST00000561425 RPL36ALQ969Q0 106 aaKnown RBP13.81□□□□□ -0.2
TPM1-232ENST00000561425 APOBP04114 4563 aaKnown RBP13.8□□□□□ -0.2
TPM1-232ENST00000561425 K7EN84 100 aa13.8□□□□□ -0.2
TPM1-232ENST00000561425 GZMBP10144 247 aa13.8□□□□□ -0.2
TPM1-232ENST00000561425 RPL23P62829 140 aaKnown RBP13.8□□□□□ -0.2
TPM1-232ENST00000561425 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
TPM1-232ENST00000561425 SEC11CQ9BY50 192 aa13.8□□□□□ -0.2
TPM1-232ENST00000561425 ADCYAP1P18509 176 aa13.79□□□□□ -0.2
TPM1-232ENST00000561425 NIT1Q86X76 327 aa13.79□□□□□ -0.2
TPM1-232ENST00000561425 FER1L6-AS1Q8NA97 138 aa13.79□□□□□ -0.2
TPM1-232ENST00000561425 F2Z2F3 143 aa13.78□□□□□ -0.2
TPM1-232ENST00000561425 P01737 135 aa13.78□□□□□ -0.2
TPM1-232ENST00000561425 PNRC1Q12796 327 aaPredicted RBP13.78□□□□□ -0.2
TPM1-232ENST00000561425 NUDT10Q8NFP7 164 aa13.78□□□□□ -0.2
TPM1-232ENST00000561425 NUDT11Q96G61 164 aa13.78□□□□□ -0.2
TPM1-232ENST00000561425 CACNG7P62955 275 aa13.77□□□□□ -0.21
TPM1-232ENST00000561425 WDR73Q6P4I2 378 aa13.77□□□□□ -0.21
TPM1-232ENST00000561425 DAZ4Q86SG3 579 aaKnown RBP13.77□□□□□ -0.21
TPM1-232ENST00000561425 DAZ3Q9NR90 486 aaKnown RBP13.77□□□□□ -0.21
TPM1-232ENST00000561425 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
TPM1-232ENST00000561425 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM1-232ENST00000561425 ZNF56Q15929 161 aa13.76□□□□□ -0.21
TPM1-232ENST00000561425 ISOC2Q96AB3 205 aa13.76□□□□□ -0.21
TPM1-232ENST00000561425 AP1S3Q96PC3 154 aa13.76□□□□□ -0.21
TPM1-232ENST00000561425 CHCHD7Q9BUK0 85 aa13.76□□□□□ -0.21
TPM1-232ENST00000561425 KRTAP4-5Q9BYR2 181 aa13.76□□□□□ -0.21
TPM1-232ENST00000561425 RNASE7Q9H1E1 156 aaKnown RBP13.76□□□□□ -0.21
TPM1-232ENST00000561425 TRAV8-3A0A0A6YYJ7 113 aa13.75□□□□□ -0.21
TPM1-232ENST00000561425 FAM231DQ6ZW35 169 aa13.75□□□□□ -0.21
TPM1-232ENST00000561425 C15orf54Q8N8G6 183 aa13.75□□□□□ -0.21
TPM1-232ENST00000561425 CNFNQ9BYD5 112 aa13.75□□□□□ -0.21
TPM1-232ENST00000561425 Q9HAA7 133 aa13.75□□□□□ -0.21
TPM1-232ENST00000561425 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
TPM1-232ENST00000561425 TRBV6-8A0A0A6YYG3 113 aa13.74□□□□□ -0.21
TPM1-232ENST00000561425 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
TPM1-232ENST00000561425 SSTP61278 116 aa13.74□□□□□ -0.21
TPM1-232ENST00000561425 LYZL1Q6UWQ5 148 aa13.74□□□□□ -0.21
TPM1-232ENST00000561425 TM2D2Q9BX73 214 aa13.74□□□□□ -0.21
TPM1-232ENST00000561425 OSTCQ9NRP0 149 aa13.74□□□□□ -0.21
TPM1-232ENST00000561425 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
TPM1-232ENST00000561425 F5H697 171 aa13.73□□□□□ -0.21
TPM1-232ENST00000561425 M0QY20 66 aa13.73□□□□□ -0.21
TPM1-232ENST00000561425 PSCAO43653 123 aa13.73□□□□□ -0.21
TPM1-232ENST00000561425 SMIM17P0DL12 118 aa13.73□□□□□ -0.21
TPM1-232ENST00000561425 CTRLP40313 264 aa13.73□□□□□ -0.21
TPM1-232ENST00000561425 C10orf91Q5T1B1 145 aa13.73□□□□□ -0.21
TPM1-232ENST00000561425 RPP21Q9H633 154 aaKnown RBP13.73□□□□□ -0.21
TPM1-232ENST00000561425 TPPP3Q9BW30 176 aa13.72□□□□□ -0.21
TPM1-232ENST00000561425 NTF3P20783 257 aa13.71□□□□□ -0.21
TPM1-232ENST00000561425 KRTAP10-1P60331 282 aa13.71□□□□□ -0.21
TPM1-232ENST00000561425 NTM-AS1Q6ZSK4 140 aa13.71□□□□□ -0.21
TPM1-232ENST00000561425 Q8N814 137 aa13.71□□□□□ -0.21
TPM1-232ENST00000561425 MAPKAPK5-AS1Q8N8E1 139 aa13.71□□□□□ -0.21
TPM1-232ENST00000561425 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
TPM1-232ENST00000561425 DNAJC30Q96LL9 226 aa13.71□□□□□ -0.21
TPM1-232ENST00000561425 APOC3P02656 99 aa13.7□□□□□ -0.22
TPM1-232ENST00000561425 ATRAIDQ6UW56 229 aa13.7□□□□□ -0.22
TPM1-232ENST00000561425 Q8N1X5 172 aa13.7□□□□□ -0.22
TPM1-232ENST00000561425 URGCP-MRPS24S4R325 110 aa13.7□□□□□ -0.22
TPM1-232ENST00000561425 PPP1R2P9O14990 202 aa13.69□□□□□ -0.22
TPM1-232ENST00000561425 TMEM97Q5BJF2 176 aa13.69□□□□□ -0.22
TPM1-232ENST00000561425 CT83Q5H943 113 aa13.69□□□□□ -0.22
TPM1-232ENST00000561425 SUMO4Q6EEV6 95 aa13.69□□□□□ -0.22
TPM1-232ENST00000561425 COX11Q9Y6N1 276 aa13.69□□□□□ -0.22
TPM1-232ENST00000561425 MT-ND4LP03901 98 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 TRGC1P0CF51 173 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 XGP55808 180 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 WFDC2Q14508 124 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 ELOBQ15370 118 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 SVBPQ8N300 66 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 GTSF1Q8WW33 167 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 KLK12Q9UKR0 248 aa13.68□□□□□ -0.22
TPM1-232ENST00000561425 A0A087WX48 190 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 A8MWL6 223 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 H7C1H1 209 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 GCSHP23434 173 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
TPM1-232ENST00000561425 ANAPC16Q96DE5 110 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 V9GYV3 84 aa13.67□□□□□ -0.22
TPM1-232ENST00000561425 FOXA3P55318 350 aaPredicted RBP13.66□□□□□ -0.22
TPM1-232ENST00000561425 CLRN3Q8NCR9 226 aa13.66□□□□□ -0.22
TPM1-232ENST00000561425 SNAPINO95295 136 aa13.65□□□□□ -0.22
TPM1-232ENST00000561425 MGPP08493 103 aa13.65□□□□□ -0.22
TPM1-232ENST00000561425 IQCJQ1A5X6 159 aa13.65□□□□□ -0.22
TPM1-232ENST00000561425 RASL11AQ6T310 242 aa13.65□□□□□ -0.22
TPM1-232ENST00000561425 RMI2Q96E14 147 aa13.65□□□□□ -0.22
TPM1-232ENST00000561425 IGLV5-52A0A0A0MRZ9 124 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 TMEM262E9PQX1 116 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 PKIAP61925 76 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 Q0VG73 95 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 RHEBQ15382 184 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 MPV17L2Q567V2 206 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 ENHOQ6UWT2 76 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
TPM1-232ENST00000561425 ABCA13Q86UQ4 5058 aa13.63□□□□□ -0.23
TPM1-232ENST00000561425 TWIST1Q15672 202 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms