RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 LINC00336Q6ZUF6 198 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 WFDC10BQ8IUB3 73 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 C15orf54Q8N8G6 183 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 LYPD6BQ8NI32 183 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 RPL36ALQ969Q0 106 aaKnown RBP5.5□□□□□ -1.53
LRRC28-219ENST00000560483 UPK3BQ9BT76 320 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 SCRT2Q9NQ03 307 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 URGCP-MRPS24S4R325 110 aa5.5□□□□□ -1.53
LRRC28-219ENST00000560483 C19orf71A6NCJ1 209 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 F2Z2F3 143 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 K7EN84 100 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 SNAI2O43623 268 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 IGHV3-30P01768 117 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 IGHV3-33P01772 117 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 SRP19P09132 144 aaKnown RBP5.49□□□□□ -1.53
LRRC28-219ENST00000560483 IGHV3-30-3P0DP02 117 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 IGHV3-30-5P0DP03 117 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 PGLYRP4Q96LB8 373 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 GTSF1LQ9H1H1 148 aa5.49□□□□□ -1.53
LRRC28-219ENST00000560483 IGHV3-38A0A0C4DH36 116 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 A8MWL6 223 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 TMEM262E9PQX1 116 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 PSCAO43653 123 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 CRYGDP07320 174 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 NTF3P20783 257 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 RAB4BP61018 213 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 TMEM241Q24JQ0 296 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 FAM74A3Q4VXF1 159 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 Q6ZR54 194 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 TNFRSF18Q9Y5U5 241 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 DNAH10Q8IVF4 4471 aa5.48□□□□□ -1.53
LRRC28-219ENST00000560483 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
LRRC28-219ENST00000560483 TRBV7-3A0A075B6L6 115 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 A0A087WWC5 75 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 TRBV10-1A0A0K0K1A3 114 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 H7C1H1 209 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 IGLC6P0CF74 106 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 LELP1Q5T871 98 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 LINC01551Q86U37 167 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 C10orf126Q8N4M7 172 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 DPH3P1Q9H4G8 78 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 Q9HAA7 133 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 MSRB1Q9NZV6 116 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
LRRC28-219ENST00000560483 A0A087WX48 190 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 RTL8CO15255 209 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 LINC00315P59091 139 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 UFSP1Q6NVU6 142 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 FAM231DQ6ZW35 169 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 ZNF575Q86XF7 245 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 OR10G8Q8NGN5 311 aa5.46□□□□□ -1.54
LRRC28-219ENST00000560483 HIGD1CA8MV81 97 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 CTRLP40313 264 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 RPL23P62829 140 aaKnown RBP5.45□□□□□ -1.54
LRRC28-219ENST00000560483 SUMO4Q6EEV6 95 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 NFE4Q86UQ8 179 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 NEXN-AS1Q8NBZ9 246 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 CHCHD5Q9BSY4 110 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 SMDT1Q9H4I9 107 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 OSTCQ9NRP0 149 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 Q9UF83 564 aa5.45□□□□□ -1.54
LRRC28-219ENST00000560483 A0A1B0GUT8 65 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 C9JQL5 133 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 NDUFS6O75380 124 aaKnown RBP5.44□□□□□ -1.54
LRRC28-219ENST00000560483 DNAH10OSP0CZ25 163 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 TIRAPP58753 221 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 CT83Q5H943 113 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 DEFB104AQ8WTQ1 72 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 TSKUQ8WUA8 353 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 GTSF1Q8WW33 167 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 ISOC2Q96AB3 205 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 DNAH2Q9P225 4427 aa5.44□□□□□ -1.54
LRRC28-219ENST00000560483 BIRC6Q9NR09 4857 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 TRAV26-2A0A0B4J265 109 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 UBE2L6O14933 153 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 CRPP02741 224 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 UBE2D3P61077 147 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 UBE2D2P62837 147 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 RIGQ13278 110 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 LINC01556Q5JQF7 62 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 WDR73Q6P4I2 378 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 RASL11AQ6T310 242 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 DAZ4Q86SG3 579 aaKnown RBP5.43□□□□□ -1.54
LRRC28-219ENST00000560483 DNAJC30Q96LL9 226 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 DAZ3Q9NR90 486 aaKnown RBP5.43□□□□□ -1.54
LRRC28-219ENST00000560483 NAT8BQ9UHF3 227 aa5.43□□□□□ -1.54
LRRC28-219ENST00000560483 TRBV25-1A0A075B6N4 114 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 K7EP13 123 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 CAMPP49913 170 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 FOXA3P55318 350 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-219ENST00000560483 GAGE6Q13070 117 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 ELOBQ15370 118 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 TMEM97Q5BJF2 176 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 CLRN3Q8NCR9 226 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 GFRA4Q9GZZ7 299 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 KIF25-AS1Q9Y6Z4 181 aa5.42□□□□□ -1.54
LRRC28-219ENST00000560483 IGKV2D-24A0A075B6R9 120 aa5.41□□□□□ -1.54
LRRC28-219ENST00000560483 TRBV6-8A0A0A6YYG3 113 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms