RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MED9Q9NWA0 146 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 HSPB11Q9Y547 144 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 USP17L23D6RBM5 183 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 K7ERU9 68 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 M0R143 59 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 OR7C2O60412 319 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 NDUFB6O95139 128 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 CRPP02741 224 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 SMIM18P0DKX4 95 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 S100A2P29034 98 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 RPS20P60866 119 aaKnown RBP3.31□□□□□ -1.88
SPG11-208ENST00000558155 RAB32Q13637 225 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 LGALSLQ3ZCW2 172 aaPredicted RBP3.31□□□□□ -1.88
SPG11-208ENST00000558155 ZNF506Q5JVG8 444 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 PIK3CD-AS1Q5SR53 167 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 SDIM1Q6ZPB5 146 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 BOD1L2Q8IYS8 172 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 TMEM252Q8N6L7 170 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 RNF185Q96GF1 192 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 C9orf85Q96MD7 179 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 NDFIP1Q9BT67 221 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 NPCDR1Q9BY65 106 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 SAMD10Q9BYL1 202 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
SPG11-208ENST00000558155 C20orf202A1L168 122 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 C1orf196B1AJZ1 125 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 F6UZH7 168 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 TEX46H3BTG2 121 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 SSNA1O43805 119 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 TCRBP04435 133 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 PRSS1P07477 247 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 LINC00694P0DN24 101 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 TMBIM6P55061 237 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 TAS2R45P59539 299 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 HERV-K104P63124 156 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 RNF151Q2KHN1 245 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 RNASEKQ6P5S7 137 aaKnown RBP3.3□□□□□ -1.88
SPG11-208ENST00000558155 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 GOLT1AQ6ZVE7 132 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 OR2G3Q8NGZ4 309 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 TVP23CQ96ET8 276 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 LINC00479Q96M42 142 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 SLIRPQ9GZT3 109 aaKnown RBP3.3□□□□□ -1.88
SPG11-208ENST00000558155 PARLQ9H300 379 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 C11orf1Q9H5F2 150 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 OTORQ9NRC9 128 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 KCNIP2Q9NS61 270 aa3.3□□□□□ -1.88
SPG11-208ENST00000558155 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.29□□□□□ -1.88
SPG11-208ENST00000558155 A0A0J9YXV3 536 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 IGSF23A1L1A6 192 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 C17orf112F2Z3M2 114 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 PANO1I0J062 215 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 RHODO00212 210 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 HLA-DQA1P01909 254 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 S100A4P26447 101 aaKnown RBP3.29□□□□□ -1.88
SPG11-208ENST00000558155 AKR1C3P42330 323 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 KRTAP10-8P60410 259 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 S100A10P60903 97 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 UBE2L3P68036 154 aaKnown RBP3.29□□□□□ -1.88
SPG11-208ENST00000558155 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
SPG11-208ENST00000558155 MIAQ16674 131 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 TCTE3Q8IZS6 198 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 C9orf62Q8N4C0 152 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 C14orf178Q8N769 122 aaPredicted RBP3.29□□□□□ -1.88
SPG11-208ENST00000558155 C15orf54Q8N8G6 183 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 OR10G7Q8NGN6 311 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 OR5AC2Q9NZP5 309 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 Q9UF83 564 aa3.29□□□□□ -1.88
SPG11-208ENST00000558155 IGHV3-64A0A075B6Q5 118 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 A0A087WYN8 130 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 SNAI2O43623 268 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 GCGP01275 180 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 ANGP03950 147 aaKnown RBP3.28□□□□□ -1.88
SPG11-208ENST00000558155 RNASE3P12724 160 aaKnown RBP3.28□□□□□ -1.88
SPG11-208ENST00000558155 RPL36AP83881 106 aaKnown RBP3.28□□□□□ -1.88
SPG11-208ENST00000558155 KHDC3LQ587J8 217 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 PDZD11Q5EBL8 140 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 SPINK6Q6UWN8 80 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 OR5C1Q8NGR4 320 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 THAP6Q8TBB0 222 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
SPG11-208ENST00000558155 CCDC32Q9BV29 185 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 AP5S1Q9NUS5 200 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 C11orf21Q9P2W6 132 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 V9GYH0 126 aa3.28□□□□□ -1.88
SPG11-208ENST00000558155 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 TRBV7-3A0A075B6L6 115 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 TRBV6-8A0A0A6YYG3 113 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 TRBV10-1A0A0K0K1A3 114 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 A0A0U1RQV1 116 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 hDV102S1A0JD36 115 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 PHOX2AO14813 284 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
SPG11-208ENST00000558155 SEC61GP60059 68 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 CNBPP62633 177 aaKnown RBP3.27□□□□□ -1.89
SPG11-208ENST00000558155 UFSP1Q6NVU6 142 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 PQLC2Q6ZP29 291 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms