RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 FAM210AQ96ND0 272 aa15.13■□□□□ 0.01
PABPN1-207ENST00000556821 RPP21Q9H633 154 aaKnown RBP15.13■□□□□ 0.01
PABPN1-207ENST00000556821 DMBT1Q9UGM3 2413 aaPredicted RBP15.12■□□□□ 0.01
PABPN1-207ENST00000556821 F2Z2F3 143 aa15.12■□□□□ 0.01
PABPN1-207ENST00000556821 SMIM17P0DL12 118 aa15.12■□□□□ 0.01
PABPN1-207ENST00000556821 LRCOL1A6NCL2 159 aa15.11■□□□□ 0.01
PABPN1-207ENST00000556821 EREGO14944 169 aa15.11■□□□□ 0.01
PABPN1-207ENST00000556821 NDUFS6O75380 124 aaKnown RBP15.1■□□□□ 0.01
PABPN1-207ENST00000556821 MGPP08493 103 aa15.1■□□□□ 0.01
PABPN1-207ENST00000556821 CNFNQ9BYD5 112 aa15.1■□□□□ 0.01
PABPN1-207ENST00000556821 EIF5A2Q9GZV4 153 aaKnown RBP15.1■□□□□ 0.01
PABPN1-207ENST00000556821 M0QY20 66 aa15.09■□□□□ 0.01
PABPN1-207ENST00000556821 NTF3P20783 257 aa15.09■□□□□ 0.01
PABPN1-207ENST00000556821 CEBPGP53567 150 aa15.09■□□□□ 0.01
PABPN1-207ENST00000556821 GTSF1Q8WW33 167 aa15.09■□□□□ 0.01
PABPN1-207ENST00000556821 TRBV6-8A0A0A6YYG3 113 aa15.08■□□□□ 0
PABPN1-207ENST00000556821 PSCAO43653 123 aa15.08■□□□□ 0
PABPN1-207ENST00000556821 SRP19P09132 144 aaKnown RBP15.08■□□□□ 0
PABPN1-207ENST00000556821 SUMO4Q6EEV6 95 aa15.08■□□□□ 0
PABPN1-207ENST00000556821 CDPF1Q6NVV7 123 aa15.08■□□□□ 0
PABPN1-207ENST00000556821 PGPEP1Q9NXJ5 209 aa15.08■□□□□ 0
PABPN1-207ENST00000556821 TRGC1P0CF51 173 aa15.07■□□□□ 0
PABPN1-207ENST00000556821 WDR73Q6P4I2 378 aa15.07■□□□□ 0
PABPN1-207ENST00000556821 FAM231DQ6ZW35 169 aa15.07■□□□□ 0
PABPN1-207ENST00000556821 DNAJC30Q96LL9 226 aa15.07■□□□□ 0
PABPN1-207ENST00000556821 NTM-AS1Q6ZSK4 140 aa15.06■□□□□ 0
PABPN1-207ENST00000556821 SMIM7Q9BQ49 75 aa15.06■□□□□ 0
PABPN1-207ENST00000556821 URGCP-MRPS24S4R325 110 aa15.06■□□□□ 0
PABPN1-207ENST00000556821 UBR4Q5T4S7 5183 aa15.06■□□□□ 0
PABPN1-207ENST00000556821 TRAV8-3A0A0A6YYJ7 113 aa15.05■□□□□ -0
PABPN1-207ENST00000556821 CHCHD7Q9BUK0 85 aa15.05■□□□□ -0
PABPN1-207ENST00000556821 DPH3P1Q9H4G8 78 aa15.05■□□□□ -0
PABPN1-207ENST00000556821 GATCO43716 136 aaKnown RBP15.04■□□□□ -0
PABPN1-207ENST00000556821 TEX261Q6UWH6 196 aa15.04■□□□□ -0
PABPN1-207ENST00000556821 LINC01551Q86U37 167 aa15.04■□□□□ -0
PABPN1-207ENST00000556821 KLK12Q9UKR0 248 aa15.04■□□□□ -0
PABPN1-207ENST00000556821 FAT1Q14517 4588 aa15.04■□□□□ -0
PABPN1-207ENST00000556821 ZNF727A8MUV8 499 aa15.03■□□□□ -0
PABPN1-207ENST00000556821 H7C1H1 209 aa15.03■□□□□ -0
PABPN1-207ENST00000556821 WFDC2Q14508 124 aa15.03■□□□□ -0
PABPN1-207ENST00000556821 TM2D2Q9BX73 214 aa15.03■□□□□ -0
PABPN1-207ENST00000556821 A0A087WX48 190 aa15.02■□□□□ -0
PABPN1-207ENST00000556821 TWIST1Q15672 202 aa15.02■□□□□ -0
PABPN1-207ENST00000556821 MPV17L2Q567V2 206 aa15.02■□□□□ -0
PABPN1-207ENST00000556821 CT83Q5H943 113 aa15.01□□□□□ -0.01
PABPN1-207ENST00000556821 RASL11AQ6T310 242 aa15.01□□□□□ -0.01
PABPN1-207ENST00000556821 A8MWL6 223 aa15□□□□□ -0.01
PABPN1-207ENST00000556821 C9JQL5 133 aa15□□□□□ -0.01
PABPN1-207ENST00000556821 KRTAP10-1P60331 282 aa15□□□□□ -0.01
PABPN1-207ENST00000556821 TMEM97Q5BJF2 176 aa15□□□□□ -0.01
PABPN1-207ENST00000556821 Q8N814 137 aa15□□□□□ -0.01
PABPN1-207ENST00000556821 SREK1IP1Q8N9Q2 155 aaPredicted RBP15□□□□□ -0.01
PABPN1-207ENST00000556821 INAFM2P0DMQ5 153 aa14.99□□□□□ -0.01
PABPN1-207ENST00000556821 UBE2WQ96B02 151 aa14.99□□□□□ -0.01
PABPN1-207ENST00000556821 CHCHD5Q9BSY4 110 aa14.99□□□□□ -0.01
PABPN1-207ENST00000556821 EPM2AB3EWF7 344 aa14.98□□□□□ -0.01
PABPN1-207ENST00000556821 TMEM262E9PQX1 116 aa14.98□□□□□ -0.01
PABPN1-207ENST00000556821 FOXA3P55318 350 aaPredicted RBP14.98□□□□□ -0.01
PABPN1-207ENST00000556821 SRSF3P84103 164 aaKnown RBP14.98□□□□□ -0.01
PABPN1-207ENST00000556821 ELOBQ15370 118 aa14.98□□□□□ -0.01
PABPN1-207ENST00000556821 ATRAIDQ6UW56 229 aa14.98□□□□□ -0.01
PABPN1-207ENST00000556821 PGLYRP4Q96LB8 373 aa14.98□□□□□ -0.01
PABPN1-207ENST00000556821 NIT2Q9NQR4 276 aa14.98□□□□□ -0.01
PABPN1-207ENST00000556821 IQCJQ1A5X6 159 aa14.97□□□□□ -0.01
PABPN1-207ENST00000556821 KCNIP4Q6PIL6 250 aa14.97□□□□□ -0.01
PABPN1-207ENST00000556821 Q8N976 141 aa14.97□□□□□ -0.01
PABPN1-207ENST00000556821 OSTCQ9NRP0 149 aa14.97□□□□□ -0.01
PABPN1-207ENST00000556821 MYCBP2O75592 4640 aa14.97□□□□□ -0.01
PABPN1-207ENST00000556821 TRBV25-1A0A075B6N4 114 aa14.96□□□□□ -0.01
PABPN1-207ENST00000556821 TRAV26-2A0A0B4J265 109 aa14.96□□□□□ -0.01
PABPN1-207ENST00000556821 ENHOQ6UWT2 76 aa14.96□□□□□ -0.01
PABPN1-207ENST00000556821 GATD1Q8NB37 220 aa14.96□□□□□ -0.01
PABPN1-207ENST00000556821 NTN5Q8WTR8 489 aaPredicted RBP14.96□□□□□ -0.01
PABPN1-207ENST00000556821 IGKV2D-24A0A075B6R9 120 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 IGLV5-52A0A0A0MRZ9 124 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 LECT2O14960 151 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 C15orf54Q8N8G6 183 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 TSKUQ8WUA8 353 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 RMI2Q96E14 147 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 COX11Q9Y6N1 276 aa14.95□□□□□ -0.02
PABPN1-207ENST00000556821 IGHV1-24A0A0C4DH33 117 aa14.94□□□□□ -0.02
PABPN1-207ENST00000556821 GCSHP23434 173 aa14.94□□□□□ -0.02
PABPN1-207ENST00000556821 GAGE6Q13070 117 aa14.94□□□□□ -0.02
PABPN1-207ENST00000556821 ISOC2Q96AB3 205 aa14.94□□□□□ -0.02
PABPN1-207ENST00000556821 V9GYV3 84 aa14.94□□□□□ -0.02
PABPN1-207ENST00000556821 HIGD1CA8MV81 97 aa14.93□□□□□ -0.02
PABPN1-207ENST00000556821 ANGP03950 147 aaKnown RBP14.93□□□□□ -0.02
PABPN1-207ENST00000556821 PKIAP61925 76 aa14.93□□□□□ -0.02
PABPN1-207ENST00000556821 RPL23P62829 140 aaKnown RBP14.93□□□□□ -0.02
PABPN1-207ENST00000556821 RBX1P62877 108 aa14.93□□□□□ -0.02
PABPN1-207ENST00000556821 FAM74A3Q4VXF1 159 aa14.93□□□□□ -0.02
PABPN1-207ENST00000556821 BAALCQ8WXS3 180 aa14.93□□□□□ -0.02
PABPN1-207ENST00000556821 GFRA4Q9GZZ7 299 aa14.93□□□□□ -0.02
PABPN1-207ENST00000556821 XGP55808 180 aa14.92□□□□□ -0.02
PABPN1-207ENST00000556821 Q0VG73 95 aa14.92□□□□□ -0.02
PABPN1-207ENST00000556821 TMEM241Q24JQ0 296 aa14.92□□□□□ -0.02
PABPN1-207ENST00000556821 DEFB104AQ8WTQ1 72 aa14.92□□□□□ -0.02
PABPN1-207ENST00000556821 FRZBQ92765 325 aa14.92□□□□□ -0.02
PABPN1-207ENST00000556821 RPL39LQ96EH5 51 aaKnown RBP14.92□□□□□ -0.02
PABPN1-207ENST00000556821 FAM231BA6NCW3 169 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms