RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 EIF5A2Q9GZV4 153 aaKnown RBP13.74□□□□□ -0.21
VTI1B-205ENST00000555543 ABCA13Q86UQ4 5058 aa13.74□□□□□ -0.21
VTI1B-205ENST00000555543 XKRY2A2RUG3 117 aa13.73□□□□□ -0.21
VTI1B-205ENST00000555543 F5H697 171 aa13.73□□□□□ -0.21
VTI1B-205ENST00000555543 LYZL1Q6UWQ5 148 aa13.73□□□□□ -0.21
VTI1B-205ENST00000555543 DAZ4Q86SG3 579 aaKnown RBP13.73□□□□□ -0.21
VTI1B-205ENST00000555543 DAZ3Q9NR90 486 aaKnown RBP13.73□□□□□ -0.21
VTI1B-205ENST00000555543 SMIM17P0DL12 118 aa13.72□□□□□ -0.21
VTI1B-205ENST00000555543 S100A1P23297 94 aa13.72□□□□□ -0.21
VTI1B-205ENST00000555543 CACNG7P62955 275 aa13.72□□□□□ -0.21
VTI1B-205ENST00000555543 LAGE3Q14657 143 aa13.72□□□□□ -0.21
VTI1B-205ENST00000555543 RPP21Q9H633 154 aaKnown RBP13.72□□□□□ -0.21
VTI1B-205ENST00000555543 C9JQL5 133 aa13.71□□□□□ -0.21
VTI1B-205ENST00000555543 EREGO14944 169 aa13.71□□□□□ -0.21
VTI1B-205ENST00000555543 CTRLP40313 264 aa13.71□□□□□ -0.21
VTI1B-205ENST00000555543 CEBPGP53567 150 aa13.71□□□□□ -0.21
VTI1B-205ENST00000555543 NIT1Q86X76 327 aa13.71□□□□□ -0.21
VTI1B-205ENST00000555543 F2Z2F3 143 aa13.7□□□□□ -0.22
VTI1B-205ENST00000555543 NDUFS6O75380 124 aaKnown RBP13.7□□□□□ -0.22
VTI1B-205ENST00000555543 MGPP08493 103 aa13.7□□□□□ -0.22
VTI1B-205ENST00000555543 TMEM218A2RU14 115 aa13.69□□□□□ -0.22
VTI1B-205ENST00000555543 LRCOL1A6NCL2 159 aa13.69□□□□□ -0.22
VTI1B-205ENST00000555543 PSCAO43653 123 aa13.69□□□□□ -0.22
VTI1B-205ENST00000555543 CDK2AP2O75956 126 aa13.69□□□□□ -0.22
VTI1B-205ENST00000555543 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
VTI1B-205ENST00000555543 NTF3P20783 257 aa13.68□□□□□ -0.22
VTI1B-205ENST00000555543 SUMO4Q6EEV6 95 aa13.68□□□□□ -0.22
VTI1B-205ENST00000555543 TRBV6-8A0A0A6YYG3 113 aa13.67□□□□□ -0.22
VTI1B-205ENST00000555543 M0QY20 66 aa13.67□□□□□ -0.22
VTI1B-205ENST00000555543 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
VTI1B-205ENST00000555543 DNAJC30Q96LL9 226 aa13.67□□□□□ -0.22
VTI1B-205ENST00000555543 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
VTI1B-205ENST00000555543 PGPEP1Q9NXJ5 209 aa13.67□□□□□ -0.22
VTI1B-205ENST00000555543 TRGC1P0CF51 173 aa13.66□□□□□ -0.22
VTI1B-205ENST00000555543 CDPF1Q6NVV7 123 aa13.66□□□□□ -0.22
VTI1B-205ENST00000555543 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
VTI1B-205ENST00000555543 URGCP-MRPS24S4R325 110 aa13.66□□□□□ -0.22
VTI1B-205ENST00000555543 WDR73Q6P4I2 378 aa13.65□□□□□ -0.22
VTI1B-205ENST00000555543 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
VTI1B-205ENST00000555543 FAM231DQ6ZW35 169 aa13.65□□□□□ -0.22
VTI1B-205ENST00000555543 TRAV8-3A0A0A6YYJ7 113 aa13.64□□□□□ -0.23
VTI1B-205ENST00000555543 GATCO43716 136 aaKnown RBP13.64□□□□□ -0.23
VTI1B-205ENST00000555543 DPH3P1Q9H4G8 78 aa13.64□□□□□ -0.23
VTI1B-205ENST00000555543 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
VTI1B-205ENST00000555543 A0A087WX48 190 aa13.63□□□□□ -0.23
VTI1B-205ENST00000555543 WFDC2Q14508 124 aa13.63□□□□□ -0.23
VTI1B-205ENST00000555543 C10orf91Q5T1B1 145 aa13.63□□□□□ -0.23
VTI1B-205ENST00000555543 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
VTI1B-205ENST00000555543 CHCHD7Q9BUK0 85 aa13.63□□□□□ -0.23
VTI1B-205ENST00000555543 SEC11CQ9BY50 192 aa13.63□□□□□ -0.23
VTI1B-205ENST00000555543 ZNF727A8MUV8 499 aa13.62□□□□□ -0.23
VTI1B-205ENST00000555543 F8W036 122 aa13.62□□□□□ -0.23
VTI1B-205ENST00000555543 H7C1H1 209 aa13.62□□□□□ -0.23
VTI1B-205ENST00000555543 ADCYAP1P18509 176 aa13.62□□□□□ -0.23
VTI1B-205ENST00000555543 TWIST1Q15672 202 aa13.62□□□□□ -0.23
VTI1B-205ENST00000555543 TM2D2Q9BX73 214 aa13.62□□□□□ -0.23
VTI1B-205ENST00000555543 CARHSP1Q9Y2V2 147 aaKnown RBP13.62□□□□□ -0.23
VTI1B-205ENST00000555543 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
VTI1B-205ENST00000555543 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
VTI1B-205ENST00000555543 MAPKAPK5-AS1Q8N8E1 139 aa13.61□□□□□ -0.23
VTI1B-205ENST00000555543 KRTAP4-5Q9BYR2 181 aa13.61□□□□□ -0.23
VTI1B-205ENST00000555543 TMEM262E9PQX1 116 aa13.6□□□□□ -0.23
VTI1B-205ENST00000555543 KRTAP10-1P60331 282 aa13.6□□□□□ -0.23
VTI1B-205ENST00000555543 CT83Q5H943 113 aa13.6□□□□□ -0.23
VTI1B-205ENST00000555543 Q8N814 137 aa13.6□□□□□ -0.23
VTI1B-205ENST00000555543 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.6□□□□□ -0.23
VTI1B-205ENST00000555543 CHCHD5Q9BSY4 110 aa13.6□□□□□ -0.23
VTI1B-205ENST00000555543 A8MWL6 223 aa13.59□□□□□ -0.23
VTI1B-205ENST00000555543 FOXA3P55318 350 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-205ENST00000555543 KCNIP4Q6PIL6 250 aa13.59□□□□□ -0.23
VTI1B-205ENST00000555543 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
VTI1B-205ENST00000555543 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
VTI1B-205ENST00000555543 LECT2O14960 151 aa13.58□□□□□ -0.24
VTI1B-205ENST00000555543 TMEM97Q5BJF2 176 aa13.58□□□□□ -0.24
VTI1B-205ENST00000555543 TRAV26-2A0A0B4J265 109 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 ELOBQ15370 118 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 FAM74A3Q4VXF1 159 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 C15orf54Q8N8G6 183 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 Q8N976 141 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 GATD1Q8NB37 220 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 NIT2Q9NQR4 276 aa13.57□□□□□ -0.24
VTI1B-205ENST00000555543 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 IGKV2D-24A0A075B6R9 120 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 IGLV5-52A0A0A0MRZ9 124 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 APOC3P02656 99 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 GAGE6Q13070 117 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 IQCJQ1A5X6 159 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 ATRAIDQ6UW56 229 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 ENHOQ6UWT2 76 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 DEFB104AQ8WTQ1 72 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 NTN5Q8WTR8 489 aaPredicted RBP13.56□□□□□ -0.24
VTI1B-205ENST00000555543 OSTCQ9NRP0 149 aa13.56□□□□□ -0.24
VTI1B-205ENST00000555543 TSKUQ8WUA8 353 aa13.55□□□□□ -0.24
VTI1B-205ENST00000555543 BAALCQ8WXS3 180 aa13.55□□□□□ -0.24
VTI1B-205ENST00000555543 RMI2Q96E14 147 aa13.55□□□□□ -0.24
VTI1B-205ENST00000555543 DNAH8Q96JB1 4490 aa13.55□□□□□ -0.24
VTI1B-205ENST00000555543 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
VTI1B-205ENST00000555543 ANGP03950 147 aaKnown RBP13.54□□□□□ -0.24
VTI1B-205ENST00000555543 GCSHP23434 173 aa13.54□□□□□ -0.24
VTI1B-205ENST00000555543 SVBPQ8N300 66 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms