RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 EDDM3BP56851 147 aa0.31□□□□□ -2.36
SCFD1-213ENST00000554776 S100A12P80511 92 aa0.31□□□□□ -2.36
SCFD1-213ENST00000554776 DPH3Q96FX2 82 aa0.31□□□□□ -2.36
SCFD1-213ENST00000554776 SEC11CQ9BY50 192 aa0.31□□□□□ -2.36
SCFD1-213ENST00000554776 TPRP12270 2363 aaKnown RBP0.31□□□□□ -2.36
SCFD1-213ENST00000554776 ANK2Q01484 3957 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 MYO7AQ13402 2215 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 PHLPP1O60346 1717 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 GRIN2AQ12879 1464 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 DOCK11Q5JSL3 2073 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 IFNA17P01571 189 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 APODP05090 189 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 NMBP08949 121 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 DAPK1P53355 1430 aa0.3□□□□□ -2.36
SCFD1-213ENST00000554776 POLQO75417 2590 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 FAM25AB3EWG3 89 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 FAM25CB3EWG5 89 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 FAM25GB3EWG6 89 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 ARL11Q969Q4 196 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 TSC22D3Q99576 134 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 CCDC167Q9P0B6 97 aa0.29□□□□□ -2.36
SCFD1-213ENST00000554776 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
SCFD1-213ENST00000554776 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 ABCA12Q86UK0 2595 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 TRAV1-2A0A0B4J238 106 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 APOC4-APOC2K7ER74 178 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 RBM3P98179 157 aaKnown RBP0.28□□□□□ -2.36
SCFD1-213ENST00000554776 Q6ZRX8 168 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 PAIP2BQ9ULR5 123 aaKnown RBP0.28□□□□□ -2.36
SCFD1-213ENST00000554776 LINC00312Q9Y6C7 94 aa0.28□□□□□ -2.36
SCFD1-213ENST00000554776 GOLGA3Q08378 1498 aa0.28□□□□□ -2.37
SCFD1-213ENST00000554776 CADP27708 2225 aa0.28□□□□□ -2.37
SCFD1-213ENST00000554776 ZFYVE26Q68DK2 2539 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 TRBV10-3A0A0K0K1G6 114 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 FAM92AA1XBS5 289 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 HMGN1P05114 100 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 GCHFRP30047 84 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 COX6A2Q02221 97 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 LSM10Q969L4 123 aaKnown RBP0.27□□□□□ -2.37
SCFD1-213ENST00000554776 LINC00470Q9BZP3 86 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 CASKIN1Q8WXD9 1431 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 ZNF518AQ6AHZ1 1483 aa0.27□□□□□ -2.37
SCFD1-213ENST00000554776 SIPA1L3O60292 1781 aaPredicted RBP0.27□□□□□ -2.37
SCFD1-213ENST00000554776 ZNF818PQ6ZRF7 136 aa0.26□□□□□ -2.37
SCFD1-213ENST00000554776 WFDC6Q9BQY6 131 aa0.26□□□□□ -2.37
SCFD1-213ENST00000554776 AGPAT4-IT1Q9H0P7 198 aa0.26□□□□□ -2.37
SCFD1-213ENST00000554776 NWD2Q9ULI1 1742 aa0.26□□□□□ -2.37
SCFD1-213ENST00000554776 FOCADQ5VW36 1801 aa0.26□□□□□ -2.37
SCFD1-213ENST00000554776 IGF2RP11717 2491 aa0.26□□□□□ -2.37
SCFD1-213ENST00000554776 F8P00451 2351 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 UNC13BO14795 1591 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 ZMYM4Q5VZL5 1548 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 CCL8P80075 99 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 INSL4Q14641 139 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 MEIG1Q5JSS6 88 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 SYNE2Q8WXH0 6885 aaKnown RBP0.25□□□□□ -2.37
SCFD1-213ENST00000554776 MAST4O15021 2626 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 MYH9P35579 1960 aaKnown RBP0.25□□□□□ -2.37
SCFD1-213ENST00000554776 MYH7P12883 1935 aa0.25□□□□□ -2.37
SCFD1-213ENST00000554776 ARAP2Q8WZ64 1704 aa0.24□□□□□ -2.37
SCFD1-213ENST00000554776 HCG22E2RYF7 251 aa0.24□□□□□ -2.37
SCFD1-213ENST00000554776 G3V318 75 aa0.24□□□□□ -2.37
SCFD1-213ENST00000554776 SELENOWP63302 87 aa0.24□□□□□ -2.37
SCFD1-213ENST00000554776 LRP1Q07954 4544 aaKnown RBP0.24□□□□□ -2.37
SCFD1-213ENST00000554776 IFT172Q9UG01 1749 aa0.24□□□□□ -2.37
SCFD1-213ENST00000554776 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
SCFD1-213ENST00000554776 CFTRP13569 1480 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 IFT140Q96RY7 1462 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 MYH8P13535 1937 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 TRAV13-2A0A0B4J235 113 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 LOC100130705A0A1B0GUX0 176 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 Q8N8P6 123 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 RERGLQ9H628 205 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 SCP2D1Q9UJQ7 156 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 UNC79Q9P2D8 2635 aa0.23□□□□□ -2.37
SCFD1-213ENST00000554776 MBD5Q9P267 1494 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 MACF1Q9UPN3 7388 aaKnown RBP0.22□□□□□ -2.37
SCFD1-213ENST00000554776 MIF4GDA9UHW6 222 aaKnown RBP0.22□□□□□ -2.37
SCFD1-213ENST00000554776 K7EP13 123 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 PPP1R17O96001 155 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 C10orf128Q5T292 105 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 SSBP3-AS1Q7Z2R9 100 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 UBE2DNLQ8IWF7 75 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 COPS9Q8WXC6 57 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 SERP1Q9Y6X1 66 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 FSIP2Q5CZC0 6907 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 DOCK1Q14185 1865 aa0.22□□□□□ -2.37
SCFD1-213ENST00000554776 LRRC37A3O60309 1634 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 ZNF815PA8K554 130 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 SIX6O95475 246 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 SMIM6P0DI80 62 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 CCL18P55774 89 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 CFAP126Q5VTH2 177 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 Q6AWC8 147 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 BAGE3Q86Y29 109 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 TTC9CQ8N5M4 171 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.21□□□□□ -2.38
SCFD1-213ENST00000554776 AQP10Q96PS8 301 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 SNRNP25Q9BV90 132 aaKnown RBP0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms