RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 RPL36ALQ969Q0 106 aaKnown RBP5.05□□□□□ -1.6
LINC00640-201ENST00000554409 AP1S3Q96PC3 154 aa5.05□□□□□ -1.6
LINC00640-201ENST00000554409 KIF25-AS1Q9Y6Z4 181 aa5.05□□□□□ -1.6
LINC00640-201ENST00000554409 DYNC1H1Q14204 4646 aaKnown RBP5.04□□□□□ -1.6
LINC00640-201ENST00000554409 A0A1B0GVG6 124 aa5.04□□□□□ -1.6
LINC00640-201ENST00000554409 RBFOX3A6NFN3 312 aa5.04□□□□□ -1.6
LINC00640-201ENST00000554409 F2Z2F3 143 aa5.04□□□□□ -1.6
LINC00640-201ENST00000554409 CACNG7P62955 275 aa5.04□□□□□ -1.6
LINC00640-201ENST00000554409 NEXN-AS1Q8NBZ9 246 aa5.04□□□□□ -1.6
LINC00640-201ENST00000554409 CHCHD7Q9BUK0 85 aa5.04□□□□□ -1.6
LINC00640-201ENST00000554409 TRAV8-3A0A0A6YYJ7 113 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 MUC21A0A0G2JKD1 596 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 MUC21A0A140T8X8 626 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 LRCOL1A6NCL2 159 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 K7EN84 100 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 PSCAO43653 123 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 SMIM17P0DL12 118 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 GZMBP10144 247 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 CTRLP40313 264 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 NKX2-5P52952 324 aaPredicted RBP5.03□□□□□ -1.6
LINC00640-201ENST00000554409 TOR2AQ5JU69 321 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 WDR73Q6P4I2 378 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 NIT1Q86X76 327 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 NUDT10Q8NFP7 164 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 OCC1Q8TAD7 63 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 NUDT11Q96G61 164 aa5.03□□□□□ -1.6
LINC00640-201ENST00000554409 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 TRBV6-8A0A0A6YYG3 113 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 F5H697 171 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 H7C1H1 209 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 TRGC1P0CF51 173 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 TMEM97Q5BJF2 176 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 LYZL1Q6UWQ5 148 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 DAZ4Q86SG3 579 aaKnown RBP5.02□□□□□ -1.61
LINC00640-201ENST00000554409 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.02□□□□□ -1.61
LINC00640-201ENST00000554409 NTN5Q8WTR8 489 aaPredicted RBP5.02□□□□□ -1.61
LINC00640-201ENST00000554409 FAM210AQ96ND0 272 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 TPPP3Q9BW30 176 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 TM2D2Q9BX73 214 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 CNFNQ9BYD5 112 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 RPP21Q9H633 154 aaKnown RBP5.02□□□□□ -1.61
LINC00640-201ENST00000554409 Q9HAA7 133 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 DAZ3Q9NR90 486 aaKnown RBP5.02□□□□□ -1.61
LINC00640-201ENST00000554409 URGCP-MRPS24S4R325 110 aa5.02□□□□□ -1.61
LINC00640-201ENST00000554409 M0QY20 66 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 NTF3P20783 257 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 SSTP61278 116 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 PKIAP61925 76 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 ELOBQ15370 118 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 FAM231DQ6ZW35 169 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 DNAJC30Q96LL9 226 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 RNASE7Q9H1E1 156 aaKnown RBP5.01□□□□□ -1.61
LINC00640-201ENST00000554409 DPH3P1Q9H4G8 78 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 COX11Q9Y6N1 276 aa5.01□□□□□ -1.61
LINC00640-201ENST00000554409 HERC2O95714 4834 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 A0A087WX48 190 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 MGPP08493 103 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 CT83Q5H943 113 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 SUMO4Q6EEV6 95 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 KCNIP4Q6PIL6 250 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 ATRAIDQ6UW56 229 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 Q8N814 137 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 RMI2Q96E14 147 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
LINC00640-201ENST00000554409 EIF5A2Q9GZV4 153 aaKnown RBP5□□□□□ -1.61
LINC00640-201ENST00000554409 A8MWL6 223 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 GATCO43716 136 aaKnown RBP4.99□□□□□ -1.61
LINC00640-201ENST00000554409 SRP19P09132 144 aaKnown RBP4.99□□□□□ -1.61
LINC00640-201ENST00000554409 FUSP35637 526 aaKnown RBP eCLIP4.99□□□□□ -1.61
LINC00640-201ENST00000554409 FOXA3P55318 350 aaPredicted RBP4.99□□□□□ -1.61
LINC00640-201ENST00000554409 Q0VG73 95 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 RASL11AQ6T310 242 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 NTM-AS1Q6ZSK4 140 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 LINC01551Q86U37 167 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 MAPKAPK5-AS1Q8N8E1 139 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 GTSF1Q8WW33 167 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 SMIM7Q9BQ49 75 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 KRTAP17-1Q9BYP8 105 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 KLK12Q9UKR0 248 aa4.99□□□□□ -1.61
LINC00640-201ENST00000554409 TRBV25-1A0A075B6N4 114 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 IGLV5-52A0A0A0MRZ9 124 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 GCSHP23434 173 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 CEBPGP53567 150 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 KRTAP10-1P60331 282 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 TWIST1Q15672 202 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 IQCJQ1A5X6 159 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 MPV17L2Q567V2 206 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 TEX261Q6UWH6 196 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 Q8N1X5 172 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 FRZBQ92765 325 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 PGLYRP4Q96LB8 373 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 CHCHD5Q9BSY4 110 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 NIT2Q9NQR4 276 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 HSPG2P98160 4391 aa4.98□□□□□ -1.61
LINC00640-201ENST00000554409 LRP1BQ9NZR2 4599 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 IGHV1-24A0A0C4DH33 117 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 FAM231BA6NCW3 169 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 ZNF727A8MUV8 499 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms