RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MPV17L2Q567V2 206 aa12.02□□□□□ -0.49
SHMT2-206ENST00000553529 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
SHMT2-206ENST00000553529 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
SHMT2-206ENST00000553529 EIF5AL1Q6IS14 154 aaKnown RBP12.01□□□□□ -0.49
SHMT2-206ENST00000553529 Q8N976 141 aa12.01□□□□□ -0.49
SHMT2-206ENST00000553529 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
SHMT2-206ENST00000553529 IGKV2D-24A0A075B6R9 120 aa12□□□□□ -0.49
SHMT2-206ENST00000553529 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
SHMT2-206ENST00000553529 Q5VSD8 79 aa12□□□□□ -0.49
SHMT2-206ENST00000553529 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
SHMT2-206ENST00000553529 LYZL1Q6UWQ5 148 aa12□□□□□ -0.49
SHMT2-206ENST00000553529 VAX2Q9UIW0 290 aa12□□□□□ -0.49
SHMT2-206ENST00000553529 EPM2AB3EWF7 344 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 SUMO4Q6EEV6 95 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 C15orf54Q8N8G6 183 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 NUDT10Q8NFP7 164 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 DAZAP1Q96EP5 407 aaKnown RBP11.99□□□□□ -0.49
SHMT2-206ENST00000553529 NUDT11Q96G61 164 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 AP1S3Q96PC3 154 aa11.99□□□□□ -0.49
SHMT2-206ENST00000553529 TRAV8-3A0A0A6YYJ7 113 aa11.98□□□□□ -0.49
SHMT2-206ENST00000553529 TMEM262E9PQX1 116 aa11.98□□□□□ -0.49
SHMT2-206ENST00000553529 PDE6DO43924 150 aa11.98□□□□□ -0.49
SHMT2-206ENST00000553529 IFNA1P01562 189 aa11.98□□□□□ -0.49
SHMT2-206ENST00000553529 P01737 135 aa11.98□□□□□ -0.49
SHMT2-206ENST00000553529 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
SHMT2-206ENST00000553529 A0A087WX48 190 aa11.97□□□□□ -0.49
SHMT2-206ENST00000553529 M0QY20 66 aa11.97□□□□□ -0.49
SHMT2-206ENST00000553529 GAGE6Q13070 117 aa11.97□□□□□ -0.49
SHMT2-206ENST00000553529 OCC1Q8TAD7 63 aa11.97□□□□□ -0.49
SHMT2-206ENST00000553529 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
SHMT2-206ENST00000553529 TEX46H3BTG2 121 aa11.96□□□□□ -0.49
SHMT2-206ENST00000553529 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-206ENST00000553529 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-206ENST00000553529 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
SHMT2-206ENST00000553529 SMIM17P0DL12 118 aa11.95□□□□□ -0.5
SHMT2-206ENST00000553529 ATRAIDQ6UW56 229 aa11.95□□□□□ -0.5
SHMT2-206ENST00000553529 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SHMT2-206ENST00000553529 ANGP03950 147 aaKnown RBP11.94□□□□□ -0.5
SHMT2-206ENST00000553529 NTF3P20783 257 aa11.94□□□□□ -0.5
SHMT2-206ENST00000553529 CEBPGP53567 150 aa11.94□□□□□ -0.5
SHMT2-206ENST00000553529 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
SHMT2-206ENST00000553529 RPS20P60866 119 aaKnown RBP11.93□□□□□ -0.5
SHMT2-206ENST00000553529 TOR2AQ5JU69 321 aa11.93□□□□□ -0.5
SHMT2-206ENST00000553529 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
SHMT2-206ENST00000553529 RPP21Q9H633 154 aaKnown RBP11.93□□□□□ -0.5
SHMT2-206ENST00000553529 VPS13BQ7Z7G8 4022 aa11.93□□□□□ -0.5
SHMT2-206ENST00000553529 CTRLP40313 264 aa11.92□□□□□ -0.5
SHMT2-206ENST00000553529 RBX1P62877 108 aa11.92□□□□□ -0.5
SHMT2-206ENST00000553529 CACNG7P62955 275 aa11.92□□□□□ -0.5
SHMT2-206ENST00000553529 SMIM12Q96EX1 92 aa11.92□□□□□ -0.5
SHMT2-206ENST00000553529 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
SHMT2-206ENST00000553529 GAS8-AS1O95177 125 aa11.9□□□□□ -0.5
SHMT2-206ENST00000553529 HLA-DQA1P01909 254 aa11.9□□□□□ -0.5
SHMT2-206ENST00000553529 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
SHMT2-206ENST00000553529 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
SHMT2-206ENST00000553529 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 TWIST1Q15672 202 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 KCNIP4Q6PIL6 250 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
SHMT2-206ENST00000553529 CHCHD7Q9BUK0 85 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 DPH3P1Q9H4G8 78 aa11.89□□□□□ -0.51
SHMT2-206ENST00000553529 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 RASL11AQ6T310 242 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 Q6ZSA8 131 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 GATD1Q8NB37 220 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 C20orf203Q8NBC4 194 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 FRZBQ92765 325 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 C1orf43Q9BWL3 253 aa11.88□□□□□ -0.51
SHMT2-206ENST00000553529 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 F2Z2F3 143 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 CRPP02741 224 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 BLOC1S1P78537 153 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 RMI2Q96E14 147 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 PGLYRP4Q96LB8 373 aa11.87□□□□□ -0.51
SHMT2-206ENST00000553529 IGHV1-24A0A0C4DH33 117 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 XKRY2A2RUG3 117 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 TRGC1P0CF51 173 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 ELOBQ15370 118 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 SCXQ7RTU7 201 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
SHMT2-206ENST00000553529 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
SHMT2-206ENST00000553529 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
SHMT2-206ENST00000553529 C9JQL5 133 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 TMEM250H0YL14 139 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 PRSS1P07477 247 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 SRP19P09132 144 aaKnown RBP11.84□□□□□ -0.51
SHMT2-206ENST00000553529 Q0VG73 95 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 BIN3Q9NQY0 253 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
SHMT2-206ENST00000553529 H7C1H1 209 aa11.83□□□□□ -0.52
SHMT2-206ENST00000553529 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
SHMT2-206ENST00000553529 SRSF3P84103 164 aaKnown RBP11.83□□□□□ -0.52
SHMT2-206ENST00000553529 EIF5A2Q9GZV4 153 aaKnown RBP11.83□□□□□ -0.52
SHMT2-206ENST00000553529 MYCBP2O75592 4640 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms