RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CPSF1Q10570 1443 aaKnown RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 RBBP6Q7Z6E9 1792 aaKnown RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 RP1L1Q8IWN7 2480 aaPredicted RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 PATJQ8NI35 1801 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 SNRNP200O75643 2136 aaKnown RBP0.94□□□□□ -2.26
CCDC38-208ENST00000549876 AKAP12Q02952 1782 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 TCHHQ07283 1943 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 DLG5Q8TDM6 1919 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 TRAV13-2A0A0B4J235 113 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 SIX6O95475 246 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 INSL4Q14641 139 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 TTC37Q6PGP7 1564 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 SPHKAPQ2M3C7 1700 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 PEAK1Q9H792 1746 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 TNS1Q9HBL0 1735 aaKnown RBP0.94□□□□□ -2.26
CCDC38-208ENST00000549876 DOCK1Q14185 1865 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 PLXNA1Q9UIW2 1896 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 E9PCH4 1651 aa0.94□□□□□ -2.26
CCDC38-208ENST00000549876 AFDNP55196 1824 aaKnown RBP0.94□□□□□ -2.26
CCDC38-208ENST00000549876 TECTAO75443 2155 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 NRXN2Q9P2S2 1712 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 FXYD4P59646 89 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 S100A7L2Q5SY68 101 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 FAM74A4Q5TZK3 123 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 SPTSSBQ8NFR3 76 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 MYOZ3Q8TDC0 251 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 DSCR8Q96T75 97 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 DPH3P1Q9H4G8 78 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 BET1LQ9NYM9 111 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 AP4S1Q9Y587 144 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 ROBO1Q9Y6N7 1651 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 LRRC37A3O60309 1634 aa0.93□□□□□ -2.26
CCDC38-208ENST00000549876 PXDNQ92626 1479 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 TET1Q8NFU7 2136 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 RB1CC1Q8TDY2 1594 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 DOCK2Q92608 1830 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 TROQ12816 1431 aaPredicted RBP0.92□□□□□ -2.26
CCDC38-208ENST00000549876 C10orf71Q711Q0 1435 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 NSD3Q9BZ95 1437 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 RREB1Q92766 1687 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 MED12Q93074 2177 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 MED13Q9UHV7 2174 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 TRBV7-1A0A0A6YYK4 115 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 NBDYA0A0U1RRE5 68 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 RBAKDNA6NC62 111 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 HCG22E2RYF7 251 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 NCR3O14931 201 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 LINC00032P0C843 101 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 PRB4P10163 310 aaPredicted RBP0.92□□□□□ -2.26
CCDC38-208ENST00000549876 UBE2D1P51668 147 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 CAV3P56539 151 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 S100A10P60903 97 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 RBM3P98179 157 aaKnown RBP0.92□□□□□ -2.26
CCDC38-208ENST00000549876 SSBP1Q04837 148 aaKnown RBP0.92□□□□□ -2.26
CCDC38-208ENST00000549876 FXYD3Q14802 87 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 COL5A1-AS1Q5SY13 56 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 C10orf99Q6UWK7 81 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 LINC00575Q6W349 94 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 Q6ZQY7 126 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 C10orf82Q8WW14 230 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 ARHGAP5Q13017 1502 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 ABCC10Q5T3U5 1492 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 PHIPQ8WWQ0 1821 aa0.92□□□□□ -2.26
CCDC38-208ENST00000549876 PPIP5K1Q6PFW1 1433 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 SPTBP11277 2137 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 LOC101927531A0A1B0GV80 90 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 CCL3L1P16619 93 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 EFNA4P52798 201 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 GNG2P59768 71 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 KRTDAPP60985 99 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 KLKP1Q107X0 134 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 ZNF56Q15929 161 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 NCMAPQ5T1S8 102 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 C5orf56Q8N8D9 126 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 DPY30Q9C005 99 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 ABCA3Q99758 1704 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 ANKRD26Q9UPS8 1709 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 GAPVD1Q14C86 1478 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 FYCO1Q9BQS8 1478 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 ESPL1Q14674 2120 aa0.91□□□□□ -2.26
CCDC38-208ENST00000549876 CASKIN1Q8WXD9 1431 aa0.9□□□□□ -2.26
CCDC38-208ENST00000549876 SCAPERQ9BY12 1400 aa0.9□□□□□ -2.26
CCDC38-208ENST00000549876 SHROOM2Q13796 1616 aa0.9□□□□□ -2.26
CCDC38-208ENST00000549876 FLG2Q5D862 2391 aaPredicted RBP0.9□□□□□ -2.27
CCDC38-208ENST00000549876 ARAP2Q8WZ64 1704 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 PVALEFA0A1B0GWK0 134 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 NAP1L6A6NFF2 107 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 TFF1P04155 84 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 ELOF1P60002 83 aaKnown RBP0.9□□□□□ -2.27
CCDC38-208ENST00000549876 C20orf197Q8N268 126 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 COX7B2Q8TF08 81 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 LINC00312Q9Y6C7 94 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 TENM3Q9P273 2699 aa0.9□□□□□ -2.27
CCDC38-208ENST00000549876 TANC1Q9C0D5 1861 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 TOPAZ1Q8N9V7 1692 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 TRBV30A0A0K0K1B3 111 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 FXYD1O00168 92 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 MPC2O95563 127 aa0.89□□□□□ -2.27
CCDC38-208ENST00000549876 LINC00208Q96KT6 92 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms