RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SPANXA1Q9NS26 97 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 NHSL1Q5SYE7 1610 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 PTPRQQ9UMZ3 2332 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 CSMD3Q7Z407 3707 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 WNK3Q9BYP7 1800 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 LAMB1P07942 1786 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 HYDINQ4G0P3 5121 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 A0A1B0GX51 115 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 TNFSF15O95150 251 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 DBIP07108 87 aaKnown RBP-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 SCTP09683 121 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 NEFHP12036 1026 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 CCDC153Q494R4 210 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 SPANXN1Q5VSR9 72 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 MMGT1Q8N4V1 131 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 SAR1AQ9NR31 198 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 SMPXQ9UHP9 88 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 PLXNB2O15031 1838 aa-0.3□□□□□ -2.46
KNTC1-213ENST00000542727 SPEF2Q9C093 1822 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 PKDREJQ9NTG1 2253 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 MYCBP2O75592 4640 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 FAT1Q14517 4588 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 TRBV20-1A0A075B6N2 111 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 LINC01545Q5VT33 79 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 BAGE3Q86Y29 109 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 DDA1Q9BW61 102 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 NDUFA12Q9UI09 145 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 HIGD1AQ9Y241 93 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 IFT172Q9UG01 1749 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 BIVM-ERCC5R4GMW8 1640 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 HERC2O95714 4834 aa-0.31□□□□□ -2.46
KNTC1-213ENST00000542727 FXYD6-FXYD2A0A087WZ82 144 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 PIRTP0C851 137 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 PIPP12273 146 aaPredicted RBP-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 SPRR1AP35321 89 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 DCDP81605 110 aaKnown RBP-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 Q5VV11 94 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 VSTM2AQ8TAG5 236 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 SELENOSQ9BQE4 189 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 WFDC6Q9BQY6 131 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 PSMG3Q9BT73 122 aaPredicted RBP-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 SCN3BQ9NY72 215 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 GINS2Q9Y248 185 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 LSM2Q9Y333 95 aaKnown RBP-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 ZNF609O15014 1411 aa-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 IBTKQ9P2D0 1353 aaPredicted RBP-0.32□□□□□ -2.46
KNTC1-213ENST00000542727 RNF213Q63HN8 5207 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 GOLGA3Q08378 1498 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 G3V318 75 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 H0YJX3 145 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 J3QR89 54 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 C9orf116Q5BN46 136 aaPredicted RBP-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 CFAP126Q5VTH2 177 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 TNXBP22105 4242 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 SPTBN2O15020 2390 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 HECTD4Q9Y4D8 3996 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 AKAP6Q13023 2319 aa-0.33□□□□□ -2.46
KNTC1-213ENST00000542727 FLNAP21333 2647 aaKnown RBP-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 FAM208BQ5VWN6 2430 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 SETD2Q9BYW2 2564 aaPredicted RBP-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 ERCC6Q03468 1493 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 LOC730098B7Z3J9 87 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 SYNJ1O43426 1573 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 SNCGO76070 127 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 PRM1P04553 51 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 IL5P05113 134 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 UBE2D1P51668 147 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 ZNF818PQ6ZRF7 136 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 SMIM4Q8WVI0 70 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 NWD2Q9ULI1 1742 aa-0.34□□□□□ -2.46
KNTC1-213ENST00000542727 ARAP1Q96P48 1450 aa-0.35□□□□□ -2.46
KNTC1-213ENST00000542727 CREBBPQ92793 2442 aa-0.35□□□□□ -2.46
KNTC1-213ENST00000542727 ALMS1Q8TCU4 4167 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 DAPK1P53355 1430 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 GNG14A0A1W2PPG7 69 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 K7EQZ3 153 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 CBLN1P23435 193 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 UBE2G1P62253 170 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 HAMPP81172 84 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 MIC13Q5XKP0 118 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 SPTSSBQ8NFR3 76 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 C10orf82Q8WW14 230 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 AIF1LQ9BQI0 150 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 MRPL40Q9NQ50 206 aaKnown RBP-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 R4GMQ9 66 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 PPRC1Q5VV67 1664 aaKnown RBP-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 BSNQ9UPA5 3926 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 ZNF292O60281 2723 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 ZANQ9Y493 2812 aa-0.35□□□□□ -2.47
KNTC1-213ENST00000542727 PKD1L1Q8TDX9 2849 aa-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 SETXQ7Z333 2677 aaKnown RBP-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 KDM3BQ7LBC6 1761 aa-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 PIGBOS1A0A0B4J2F0 54 aa-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 S100A5P33763 92 aa-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 RRAS2P62070 204 aaPredicted RBP-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 HIST1H1AQ02539 215 aaPredicted RBP-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 KRTAP20-2Q3LI61 65 aa-0.36□□□□□ -2.47
KNTC1-213ENST00000542727 PIGYQ3MUY2 71 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms