RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 C20orf144Q9BQM9 153 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 GFRA4Q9GZZ7 299 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 TP53TG3Q9ULZ0 132 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 GOLT1BQ9Y3E0 138 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 TRGV11A0A075B6L2 103 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 TRBV24-1A0A075B6N3 115 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 TRAV9-1A0A075B6T8 112 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 A0A1B0GUT8 65 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 F2Z2F3 143 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 PRM2P04554 102 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 TYMSP04818 313 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 RAB5AP20339 215 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 NTF3P20783 257 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 FOXA3P55318 350 aaPredicted RBP5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 TWIST1Q15672 202 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 SPANXN1Q5VSR9 72 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 C1orf158Q8N1D5 194 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 PYGO2Q9BRQ0 406 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 TRAPPC1Q9Y5R8 145 aa5.16□□□□□ -1.58
CHMP4A-209ENST00000542700 A0A0J9YY99 117 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 H3BVH4 76 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 IGLC6P0CF74 106 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 CACNG7P62955 275 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 FABP9Q0Z7S8 132 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 RRN3P1Q2M238 152 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 COX19Q49B96 90 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 TMEM256Q8N2U0 113 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 Q8N814 137 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 YPEL4Q96NS1 127 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 PHLDA3Q9Y5J5 127 aa5.15□□□□□ -1.59
CHMP4A-209ENST00000542700 TRAV26-1A0A087WT03 109 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 IGHV3-16A0A0C4DH30 117 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 LRCOL1A6NCL2 159 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 C1orf196B1AJZ1 125 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 SNURFLB1AK76 121 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 M0R381 172 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 S100A8P05109 93 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 AZU1P20160 251 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 ZNF415Q09FC8 603 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 DNLZQ5SXM8 178 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 WDR73Q6P4I2 378 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 Q6ZRU5 148 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 SMIM15Q7Z3B0 74 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 OR10AG1Q8NH19 301 aa5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 MRPL18Q9H0U6 180 aaKnown RBP5.14□□□□□ -1.59
CHMP4A-209ENST00000542700 A0A1B0GW15 77 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 LYRM9A8MSI8 78 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 SNAI2O43623 268 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 TRGC2P03986 189 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 OR5AL1P0C617 328 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 RNASE3P12724 160 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 HBBP68871 147 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 KIAA1644Q3SXP7 199 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 TDRG1Q3Y452 100 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 ATP5L2Q7Z4Y8 100 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 CIRBP-AS1Q8TBR5 109 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 LINC00467Q9BRT7 94 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 SPXQ9BT56 116 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 CHAC1Q9BUX1 264 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 SSBP4Q9BWG4 385 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 GNB1LQ9BYB4 327 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 GSN-AS1Q9NRJ2 163 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 MSRB1Q9NZV6 116 aa5.13□□□□□ -1.59
CHMP4A-209ENST00000542700 PSCAO43653 123 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 NXPH4O95158 308 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 HLA-DQA1P01909 254 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 APCSP02743 223 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 TRGC1P0CF51 173 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 SMIM17P0DL12 118 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 LINC01620Q4KN68 170 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 RASL11AQ6T310 242 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 ZFP82Q8N141 532 aa5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-209ENST00000542700 A0A1B0GXF2 115 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 M0R2P5 195 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 MT-ND6P03923 174 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 MGPP08493 103 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 HOXA5P20719 270 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 CTRLP40313 264 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 RAB5BP61020 215 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 ZNF493Q6ZR52 646 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 C14orf178Q8N769 122 aaPredicted RBP5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 C16orf74Q96GX8 76 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 C9orf85Q96MD7 179 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 DPH3P1Q9H4G8 78 aa5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 MRPL16Q9NX20 251 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-209ENST00000542700 TRGV1A0A0A0MS02 117 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 F5H697 171 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 EVI2AP22794 236 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 NDUFA6P56556 154 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 ZNF876PQ49A33 203 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 FAM104BQ5XKR9 115 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 AMN1Q8IY45 258 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 TMEM263Q8WUH6 116 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 TMEM191AQ9H0A3 160 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 JPT2Q9H910 190 aa5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 NOP10Q9NPE3 64 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-209ENST00000542700 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 GAGE7O76087 117 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms