RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PRORYQ9H606 182 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 TNFRSF13BO14836 293 aaPredicted RBP4.98□□□□□ -1.61
LSAMP-207ENST00000539563 NDUFB1O75438 58 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 PRB1P04280 392 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 LRRC75A-AS1Q8N1F1 130 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 IGHV3-30P01768 117 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 IGHV3-33P01772 117 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 IGHV3-30-3P0DP02 117 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 IGHV3-30-5P0DP03 117 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 PTPRSQ13332 1948 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 JMJD7-PLA2G4BH0Y9G9 81 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 RANBP2P49792 3224 aaKnown RBP4.97□□□□□ -1.61
LSAMP-207ENST00000539563 A4D1N5 150 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 TMEM256-PLSCR3K7ERE1 68 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 MUC22E2RYF6 1773 aaPredicted RBP4.97□□□□□ -1.61
LSAMP-207ENST00000539563 NDUFA11Q86Y39 141 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 LINC00574Q9H8X3 128 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 PRAC2D3DTV9 90 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 IGHV1-58A0A0C4DH39 117 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 VSIG2Q96IQ7 327 aa4.97□□□□□ -1.61
LSAMP-207ENST00000539563 CITED2Q99967 270 aaPredicted RBP4.97□□□□□ -1.61
LSAMP-207ENST00000539563 IGLV10-54A0A075B6I4 117 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 IGLL5B9A064 214 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 SPRY2O43597 315 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 E7EUB6 86 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 FANCD2OSQ96PS1 177 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 SMAD5-AS1Q9Y6J3 95 aa4.96□□□□□ -1.61
LSAMP-207ENST00000539563 A0A0J9YXV3 536 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 A0A0J9YX75 114 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 Q8NA96 180 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 MDFICQ9P1T7 246 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 A0A1W2PNU3 283 aaPredicted RBP4.96□□□□□ -1.62
LSAMP-207ENST00000539563 CCL25O15444 150 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 HIGD2BQ4VC39 106 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 DIRC1Q969H9 104 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 RBM3P98179 157 aaKnown RBP4.96□□□□□ -1.62
LSAMP-207ENST00000539563 C14orf177Q52M58 125 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 PLA2G2EQ9NZK7 142 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 UBE2AP49459 152 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 ATRXP46100 2492 aa4.96□□□□□ -1.62
LSAMP-207ENST00000539563 COL5A1P20908 1838 aaPredicted RBP4.95□□□□□ -1.62
LSAMP-207ENST00000539563 ANKRD39Q53RE8 183 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 ATOX1O00244 68 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 RPL39P62891 51 aaKnown RBP4.95□□□□□ -1.62
LSAMP-207ENST00000539563 SPAG11BQ08648 103 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 LGALS9O00182 355 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 MAP6D1Q9H9H5 199 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 IGHV4-4A0A075B6R2 117 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 H7C423 109 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 NREPQ16612 68 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 C11orf1Q9H5F2 150 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 EXPH5Q8NEV8 1989 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 DNAJC9-AS1A6NH13 148 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 ODF1Q14990 250 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 CACNA1HO95180 2353 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 NRGNQ92686 78 aa4.95□□□□□ -1.62
LSAMP-207ENST00000539563 ODF3BA8MYP8 253 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 PDE6GP18545 87 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 LINC00173Q6ZV60 143 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 TMEM61Q8N0U2 210 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 DEFB135Q30KP9 77 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 Q6YL49 198 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 TEN1Q86WV5 123 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 MED13LQ71F56 2210 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 IGF1P05019 195 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 PRR14LQ5THK1 2151 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 UNQ9165/PRO28630Q6UXU0 137 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 MP68P56378 58 aa4.94□□□□□ -1.62
LSAMP-207ENST00000539563 NCR3O14931 201 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 KLK12Q9UKR0 248 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 PLCE1Q9P212 2302 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 NUPR1O60356 82 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 IGHV4-31P0DP07 118 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 PSMB8P28062 276 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 CHD7Q9P2D1 2997 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 IGKV1D-37A0A075B6S9 117 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 LYRM9A8MSI8 78 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 H3BT86 120 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 TRBV12-3P01733 135 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 LINC01620Q4KN68 170 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 ARHGAP32A7KAX9 2087 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 LMO4P61968 165 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 P0C879 139 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 NBASA2RRP1 2371 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 MIR7-3HGQ8N6C7 128 aa4.93□□□□□ -1.62
LSAMP-207ENST00000539563 A0A1B0GX51 115 aa4.92□□□□□ -1.62
LSAMP-207ENST00000539563 CHKB-CPT1BH3BT56 60 aa4.92□□□□□ -1.62
LSAMP-207ENST00000539563 MIAQ16674 131 aa4.92□□□□□ -1.62
LSAMP-207ENST00000539563 MSMPQ1L6U9 139 aa4.92□□□□□ -1.62
LSAMP-207ENST00000539563 C20orf203Q8NBC4 194 aa4.92□□□□□ -1.62
LSAMP-207ENST00000539563 TET2Q6N021 2002 aaPredicted RBP4.92□□□□□ -1.62
LSAMP-207ENST00000539563 FXYD2P54710 66 aa4.92□□□□□ -1.62
LSAMP-207ENST00000539563 ESM1Q9NQ30 184 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms