RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 DOPEY1Q5JWR5 2465 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 STRCQ7RTU9 1775 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 KIDINS220Q9ULH0 1771 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 MYH13Q9UKX3 1938 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 GOLGB1Q14789 3259 aaKnown RBP1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 NCR3O14931 201 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 LINC00032P0C843 101 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 ATP5EP56381 51 aaPredicted RBP1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 SEC11AP67812 179 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 FXYD3Q14802 87 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 SCP2D1Q9UJQ7 156 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 HECTD1Q9ULT8 2610 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 DAPK1P53355 1430 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 CASZ1Q86V15 1759 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 MYH6P13533 1939 aa1.21□□□□□ -2.22
SRGAP1-203ENST00000537585 TRPM7Q96QT4 1865 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 CDK12Q9NYV4 1490 aaPredicted RBP1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 GCN1Q92616 2671 aaKnown RBP1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 CHKB-CPT1BH3BT56 60 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 PPP1R17O96001 155 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 UBE2D1P51668 147 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 CCL8P80075 99 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 PCOTHQ58A44 107 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 FAM74A4Q5TZK3 123 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 Q6ZQY7 126 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 MED12LQ86YW9 2145 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 C5orf56Q8N8D9 126 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 COX7B2Q8TF08 81 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 CCL19Q99731 98 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 V9GYS6 101 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 CASKIN1Q8WXD9 1431 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 SCAPERQ9BY12 1400 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 MYOFQ9NZM1 2061 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 UNC13CQ8NB66 2214 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 MUC4Q99102 2169 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 CUL7Q14999 1698 aa1.2□□□□□ -2.22
SRGAP1-203ENST00000537585 IFT140Q96RY7 1462 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 CEP192Q8TEP8 1941 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 LOC110117498A0A087WWA1 95 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 NAP1L6A6NFF2 107 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 J3QKU1 62 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 M0R2N4 97 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 SIX6O95475 246 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 KRTDAPP60985 99 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 XAF1Q6GPH4 301 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 VPS8Q8N3P4 1428 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 BET1LQ9NYM9 111 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 V9GYV3 84 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 ABCA2Q9BZC7 2435 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 MYLKQ15746 1914 aa1.19□□□□□ -2.22
SRGAP1-203ENST00000537585 GOLGA3Q08378 1498 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 BCL9LQ86UU0 1499 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 C10orf71Q711Q0 1435 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 A0A0G2JND7 137 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 NBDYA0A0U1RRE5 68 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 TRAPPC2P0DI81 140 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 TRAPPC2BP0DI82 140 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 EDDM3BP56851 147 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 SPAG11BQ08648 103 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 SPAG11AQ6PDA7 123 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 UNQ6190/PRO20217Q6UXQ8 127 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 ZNF818PQ6ZRF7 136 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 NDUFA11Q86Y39 141 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 AMELYQ99218 206 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 UQCR10Q9UDW1 63 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 COL4A5P29400 1685 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 MKI67P46013 3256 aaKnown RBP1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 ATG2AQ2TAZ0 1938 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 ALPK3Q96L96 1907 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 ZFYVE16Q7Z3T8 1539 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 KALRNO60229 2985 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 ALPK2Q86TB3 2170 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 MUC3AQ02505 3323 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 ANK1P16157 1881 aa1.18□□□□□ -2.22
SRGAP1-203ENST00000537585 RTTNQ86VV8 2226 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 NRKQ7Z2Y5 1582 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 BRWD1Q9NSI6 2320 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 SETD2Q9BYW2 2564 aaPredicted RBP1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 CELSR3Q9NYQ7 3312 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 ARFGEF3Q5TH69 2177 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 RYR1P21817 5038 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 ZNF609O15014 1411 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 RANBP2P49792 3224 aaKnown RBP1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 TRBV7-3A0A075B6L6 115 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 CTXND1A0A1B0GTU2 59 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 PVALEFA0A1B0GWK0 134 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 APOC3P02656 99 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 CCL3L1P16619 93 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 CAV3P56539 151 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 ELOF1P60002 83 aaKnown RBP1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 Q0VG73 95 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 PPP1R1CQ8WVI7 109 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 CYP4F30PQ9H0H9 118 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 FAIMQ9NVQ4 179 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 V9GYH0 126 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms