RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 TRBV7-3A0A075B6L6 115 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 TRAV8-6A0A0B4J262 113 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 F2Z2F3 143 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 K7EP13 123 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 IGHV3-30P01768 117 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 IGHV3-33P01772 117 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 IGHV3-30-5P0DP03 117 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 NTF3P20783 257 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 EVI2AP22794 236 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 CACNG7P62955 275 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 HSPG2P98160 4391 aa7.64□□□□□ -1.19
RFX4-205ENST00000536722 XKRY2A2RUG3 117 aa7.63□□□□□ -1.19
RFX4-205ENST00000536722 ZNF727A8MUV8 499 aa7.63□□□□□ -1.19
RFX4-205ENST00000536722 IBA57-AS1B1ANH7 110 aa7.63□□□□□ -1.19
RFX4-205ENST00000536722 M0QY20 66 aa7.63□□□□□ -1.19
RFX4-205ENST00000536722 RPL36AP83881 106 aaKnown RBP7.63□□□□□ -1.19
RFX4-205ENST00000536722 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
RFX4-205ENST00000536722 WDR73Q6P4I2 378 aa7.63□□□□□ -1.19
RFX4-205ENST00000536722 RPL36ALQ969Q0 106 aaKnown RBP7.63□□□□□ -1.19
RFX4-205ENST00000536722 TRAV9-2A0A087WT02 112 aa7.62□□□□□ -1.19
RFX4-205ENST00000536722 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
RFX4-205ENST00000536722 GATCO43716 136 aaKnown RBP7.62□□□□□ -1.19
RFX4-205ENST00000536722 FOXA3P55318 350 aaPredicted RBP7.62□□□□□ -1.19
RFX4-205ENST00000536722 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
RFX4-205ENST00000536722 NIT1Q86X76 327 aa7.62□□□□□ -1.19
RFX4-205ENST00000536722 C10orf126Q8N4M7 172 aa7.62□□□□□ -1.19
RFX4-205ENST00000536722 KRTAP4-6Q9BYQ5 205 aa7.62□□□□□ -1.19
RFX4-205ENST00000536722 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
RFX4-205ENST00000536722 A0A087WWC5 75 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 F5H697 171 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 MGPP08493 103 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 FUSP35637 526 aaKnown RBP eCLIP7.61□□□□□ -1.19
RFX4-205ENST00000536722 ERVFC1-1P60608 527 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
RFX4-205ENST00000536722 CT83Q5H943 113 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 SPATA12Q7Z6I5 190 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 DAZ4Q86SG3 579 aaKnown RBP7.61□□□□□ -1.19
RFX4-205ENST00000536722 ISOC2Q96AB3 205 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 DNAJC30Q96LL9 226 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 DAZ3Q9NR90 486 aaKnown RBP7.61□□□□□ -1.19
RFX4-205ENST00000536722 OSTCQ9NRP0 149 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 V9GYV3 84 aa7.61□□□□□ -1.19
RFX4-205ENST00000536722 RYR1P21817 5038 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 A0A087WTM6 91 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 TRGC1P0CF51 173 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 NFE4Q86UQ8 179 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 PGLYRP4Q96LB8 373 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 DPH3P1Q9H4G8 78 aa7.6□□□□□ -1.19
RFX4-205ENST00000536722 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 LRCOL1A6NCL2 159 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 A8MWL6 223 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 IFITM2Q01629 132 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 LAGE3Q14657 143 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 TWIST1Q15672 202 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 TSKUQ8WUA8 353 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 Q9HAA7 133 aa7.59□□□□□ -1.19
RFX4-205ENST00000536722 TRAV26-2A0A0B4J265 109 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 C16orf90A8MZG2 172 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 PEA15Q15121 130 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 TMEM241Q24JQ0 296 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 FAM74A3Q4VXF1 159 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 SMDT1Q9H4I9 107 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 NAT8Q9UHE5 227 aa7.58□□□□□ -1.2
RFX4-205ENST00000536722 HIGD1CA8MV81 97 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 GAS8-AS1O95177 125 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 WFDC2Q14508 124 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 RASL11AQ6T310 242 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 MAPKAPK5-AS1Q8N8E1 139 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 CLRN3Q8NCR9 226 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 GFRA4Q9GZZ7 299 aa7.57□□□□□ -1.2
RFX4-205ENST00000536722 FAM231BA6NCW3 169 aa7.56□□□□□ -1.2
RFX4-205ENST00000536722 ADIRFQ15847 76 aa7.56□□□□□ -1.2
RFX4-205ENST00000536722 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
RFX4-205ENST00000536722 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
RFX4-205ENST00000536722 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
RFX4-205ENST00000536722 NIT2Q9NQR4 276 aa7.56□□□□□ -1.2
RFX4-205ENST00000536722 H7C1H1 209 aa7.55□□□□□ -1.2
RFX4-205ENST00000536722 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
RFX4-205ENST00000536722 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
RFX4-205ENST00000536722 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
RFX4-205ENST00000536722 KLK12Q9UKR0 248 aa7.55□□□□□ -1.2
RFX4-205ENST00000536722 A0A1B0GUT8 65 aa7.54□□□□□ -1.2
RFX4-205ENST00000536722 CLLU1Q5K131 121 aa7.54□□□□□ -1.2
RFX4-205ENST00000536722 ATRAIDQ6UW56 229 aa7.54□□□□□ -1.2
RFX4-205ENST00000536722 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
RFX4-205ENST00000536722 C15orf54Q8N8G6 183 aa7.54□□□□□ -1.2
RFX4-205ENST00000536722 Q8N976 141 aa7.54□□□□□ -1.2
RFX4-205ENST00000536722 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
RFX4-205ENST00000536722 A0A087WX48 190 aa7.53□□□□□ -1.2
RFX4-205ENST00000536722 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
RFX4-205ENST00000536722 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
RFX4-205ENST00000536722 GAGE6Q13070 117 aa7.53□□□□□ -1.2
RFX4-205ENST00000536722 TMEM97Q5BJF2 176 aa7.53□□□□□ -1.2
RFX4-205ENST00000536722 CHCHD5Q9BSY4 110 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms