RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PRORYQ9H606 182 aa13.83□□□□□ -0.2
SFSWAP-203ENST00000535236 C20orf203Q8NBC4 194 aa13.83□□□□□ -0.2
SFSWAP-203ENST00000535236 ANAPC1Q9H1A4 1944 aa13.83□□□□□ -0.2
SFSWAP-203ENST00000535236 TRBV6-1A0A0K0K1D8 114 aa13.82□□□□□ -0.2
SFSWAP-203ENST00000535236 MSMPQ1L6U9 139 aa13.81□□□□□ -0.2
SFSWAP-203ENST00000535236 MED13LQ71F56 2210 aa13.81□□□□□ -0.2
SFSWAP-203ENST00000535236 HILS1P60008 231 aa13.81□□□□□ -0.2
SFSWAP-203ENST00000535236 KIR2DL5BA0A0G2JN68 375 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 KIR2DL5BA0A0G2JPC4 375 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 NUPR1O60356 82 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 KIR2DL5AQ8N109 375 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 LMO4P61968 165 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 IGHV4-31P0DP07 118 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 COA6Q5JTJ3 125 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 TTTY13Q9BZ97 58 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 TMEM256-PLSCR3K7ERE1 68 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 ATOX1O00244 68 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 CLEC2BQ92478 149 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 HIGD1BQ9P298 99 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 FXYD2P54710 66 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 Q6YL49 198 aa13.8□□□□□ -0.2
SFSWAP-203ENST00000535236 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 IGLV2-14P01704 120 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 NACAE9PAV3 2078 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 WISP2O76076 250 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 Q6ZUT4 128 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 Q6ZTI0 123 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 LINC00269Q8N2A0 174 aa13.79□□□□□ -0.2
SFSWAP-203ENST00000535236 REG3AQ06141 175 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 HIGD2AQ9BW72 106 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 PLCE1Q9P212 2302 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 ODF3BA8MYP8 253 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 FAM222AQ5U5X8 452 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 CEMP1Q6PRD7 247 aaPredicted RBP13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 LYRM9A8MSI8 78 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 INAFM1C9JVW0 142 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 UFSP1Q6NVU6 142 aa13.78□□□□□ -0.2
SFSWAP-203ENST00000535236 PLA2G5P39877 138 aa13.77□□□□□ -0.2
SFSWAP-203ENST00000535236 TEN1Q86WV5 123 aa13.77□□□□□ -0.2
SFSWAP-203ENST00000535236 SHANK1Q9Y566 2161 aa13.77□□□□□ -0.2
SFSWAP-203ENST00000535236 SMIM9A6NGZ8 99 aa13.77□□□□□ -0.2
SFSWAP-203ENST00000535236 NOTCH4Q99466 2003 aa13.77□□□□□ -0.21
SFSWAP-203ENST00000535236 CRYGDP07320 174 aa13.77□□□□□ -0.21
SFSWAP-203ENST00000535236 SEC61GP60059 68 aa13.77□□□□□ -0.21
SFSWAP-203ENST00000535236 NFE4Q86UQ8 179 aa13.77□□□□□ -0.21
SFSWAP-203ENST00000535236 ZFAND2AQ8N6M9 145 aa13.77□□□□□ -0.21
SFSWAP-203ENST00000535236 DEFB131BA0A096LNP1 70 aa13.76□□□□□ -0.21
SFSWAP-203ENST00000535236 LYPD6Q86Y78 171 aa13.76□□□□□ -0.21
SFSWAP-203ENST00000535236 SPATA25Q9BR10 227 aa13.76□□□□□ -0.21
SFSWAP-203ENST00000535236 ZFHX2Q9C0A1 2572 aaPredicted RBP13.76□□□□□ -0.21
SFSWAP-203ENST00000535236 TRBV10-2A0A0K0K1G8 114 aa13.76□□□□□ -0.21
SFSWAP-203ENST00000535236 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
SFSWAP-203ENST00000535236 LRCOL1A6NCL2 159 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 LINC01548A6NM66 108 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 B5MCH6 92 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 TP53TG3Q9ULZ0 132 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 P0DMU3 169 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 FAM231AP0DMU4 169 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 FAM231CP0DMU5 169 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 PDE6GP18545 87 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 CDPF1Q6NVV7 123 aa13.75□□□□□ -0.21
SFSWAP-203ENST00000535236 FAM236AA0A1B0GUQ0 79 aa13.74□□□□□ -0.21
SFSWAP-203ENST00000535236 FAM236BA0A1B0GV22 79 aa13.74□□□□□ -0.21
SFSWAP-203ENST00000535236 ODF1Q14990 250 aa13.74□□□□□ -0.21
SFSWAP-203ENST00000535236 ODF3Q96PU9 254 aa13.74□□□□□ -0.21
SFSWAP-203ENST00000535236 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
SFSWAP-203ENST00000535236 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
SFSWAP-203ENST00000535236 SMIM20Q8N5G0 67 aa13.73□□□□□ -0.21
SFSWAP-203ENST00000535236 C19orf71A6NCJ1 209 aa13.73□□□□□ -0.21
SFSWAP-203ENST00000535236 DEFB114Q30KQ6 69 aa13.73□□□□□ -0.21
SFSWAP-203ENST00000535236 IGKV4-1P06312 121 aa13.73□□□□□ -0.21
SFSWAP-203ENST00000535236 KIR2DL5BQ8NHK3 375 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 H3BT86 120 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 IGF1P05019 195 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 A0A087WZ39 114 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 IGKV2D-26A0A0A0MRZ7 120 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 IGKV1D-37A0A075B6S9 117 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 FAM19A1Q7Z5A9 133 aa13.72□□□□□ -0.21
SFSWAP-203ENST00000535236 MIAQ16674 131 aa13.71□□□□□ -0.21
SFSWAP-203ENST00000535236 TDRG1Q3Y452 100 aa13.71□□□□□ -0.22
SFSWAP-203ENST00000535236 FAM110AQ9BQ89 295 aa13.7□□□□□ -0.22
SFSWAP-203ENST00000535236 K7EQG2 157 aa13.7□□□□□ -0.22
SFSWAP-203ENST00000535236 ZNF80P51504 273 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-203ENST00000535236 WFDC2Q14508 124 aa13.7□□□□□ -0.22
SFSWAP-203ENST00000535236 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-203ENST00000535236 A0A096LNI7 61 aa13.7□□□□□ -0.22
SFSWAP-203ENST00000535236 MUC6Q6W4X9 2439 aa13.69□□□□□ -0.22
SFSWAP-203ENST00000535236 SS18L2Q9UHA2 77 aa13.69□□□□□ -0.22
SFSWAP-203ENST00000535236 CRYGBP07316 175 aa13.69□□□□□ -0.22
SFSWAP-203ENST00000535236 H7C423 109 aa13.67□□□□□ -0.22
SFSWAP-203ENST00000535236 BPY2O14599 106 aa13.67□□□□□ -0.22
SFSWAP-203ENST00000535236 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
SFSWAP-203ENST00000535236 FOXI1Q12951 378 aa13.66□□□□□ -0.22
SFSWAP-203ENST00000535236 LINC00482Q8N8I6 264 aa13.66□□□□□ -0.22
SFSWAP-203ENST00000535236 MIFP14174 115 aa13.66□□□□□ -0.22
SFSWAP-203ENST00000535236 Q6ZSV7 163 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms