RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 SMIM17P0DL12 118 aa12.75□□□□□ -0.37
PACS1-215ENST00000534273 LYZL1Q6UWQ5 148 aa12.75□□□□□ -0.37
PACS1-215ENST00000534273 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
PACS1-215ENST00000534273 RNASE7Q9H1E1 156 aaKnown RBP12.75□□□□□ -0.37
PACS1-215ENST00000534273 ERVFC1-1P60608 527 aa12.74□□□□□ -0.37
PACS1-215ENST00000534273 RPP21Q9H633 154 aaKnown RBP12.74□□□□□ -0.37
PACS1-215ENST00000534273 A0A087WTM6 91 aa12.73□□□□□ -0.37
PACS1-215ENST00000534273 LRP1BQ9NZR2 4599 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 F8W036 122 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 EREGO14944 169 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 ADCYAP1P18509 176 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 CTRLP40313 264 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 CEBPGP53567 150 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 WDR73Q6P4I2 378 aa12.72□□□□□ -0.37
PACS1-215ENST00000534273 LAGE3Q14657 143 aa12.71□□□□□ -0.37
PACS1-215ENST00000534273 Q9HAA7 133 aa12.71□□□□□ -0.37
PACS1-215ENST00000534273 NTF3P20783 257 aa12.7□□□□□ -0.38
PACS1-215ENST00000534273 DAZ4Q86SG3 579 aaKnown RBP12.7□□□□□ -0.38
PACS1-215ENST00000534273 NIT1Q86X76 327 aa12.7□□□□□ -0.38
PACS1-215ENST00000534273 SMIM7Q9BQ49 75 aa12.7□□□□□ -0.38
PACS1-215ENST00000534273 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
PACS1-215ENST00000534273 DAZ3Q9NR90 486 aaKnown RBP12.7□□□□□ -0.38
PACS1-215ENST00000534273 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
PACS1-215ENST00000534273 M0QY20 66 aa12.69□□□□□ -0.38
PACS1-215ENST00000534273 MGPP08493 103 aa12.69□□□□□ -0.38
PACS1-215ENST00000534273 TRGC1P0CF51 173 aa12.69□□□□□ -0.38
PACS1-215ENST00000534273 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
PACS1-215ENST00000534273 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
PACS1-215ENST00000534273 TRBV6-8A0A0A6YYG3 113 aa12.68□□□□□ -0.38
PACS1-215ENST00000534273 GATCO43716 136 aaKnown RBP12.68□□□□□ -0.38
PACS1-215ENST00000534273 APOC3P02656 99 aa12.68□□□□□ -0.38
PACS1-215ENST00000534273 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
PACS1-215ENST00000534273 SVBPQ8N300 66 aa12.68□□□□□ -0.38
PACS1-215ENST00000534273 RYR1P21817 5038 aa12.67□□□□□ -0.38
PACS1-215ENST00000534273 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
PACS1-215ENST00000534273 PSCAO43653 123 aa12.67□□□□□ -0.38
PACS1-215ENST00000534273 FUSP35637 526 aaKnown RBP eCLIP12.67□□□□□ -0.38
PACS1-215ENST00000534273 TWIST1Q15672 202 aa12.67□□□□□ -0.38
PACS1-215ENST00000534273 FAM74A3Q4VXF1 159 aa12.67□□□□□ -0.38
PACS1-215ENST00000534273 URGCP-MRPS24S4R325 110 aa12.67□□□□□ -0.38
PACS1-215ENST00000534273 DNAH5Q8TE73 4624 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 TRAV8-3A0A0A6YYJ7 113 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 ZNF727A8MUV8 499 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 H7C1H1 209 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 LINC01551Q86U37 167 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.66□□□□□ -0.38
PACS1-215ENST00000534273 DNAJC30Q96LL9 226 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
PACS1-215ENST00000534273 A8MWL6 223 aa12.65□□□□□ -0.38
PACS1-215ENST00000534273 SNAPINO95295 136 aa12.65□□□□□ -0.38
PACS1-215ENST00000534273 CT83Q5H943 113 aa12.65□□□□□ -0.38
PACS1-215ENST00000534273 CDPF1Q6NVV7 123 aa12.65□□□□□ -0.38
PACS1-215ENST00000534273 TM2D2Q9BX73 214 aa12.65□□□□□ -0.38
PACS1-215ENST00000534273 A0A087WX48 190 aa12.64□□□□□ -0.39
PACS1-215ENST00000534273 NTM-AS1Q6ZSK4 140 aa12.64□□□□□ -0.39
PACS1-215ENST00000534273 TMEM262E9PQX1 116 aa12.63□□□□□ -0.39
PACS1-215ENST00000534273 TMEM97Q5BJF2 176 aa12.63□□□□□ -0.39
PACS1-215ENST00000534273 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
PACS1-215ENST00000534273 KLK12Q9UKR0 248 aa12.63□□□□□ -0.39
PACS1-215ENST00000534273 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
PACS1-215ENST00000534273 ELOBQ15370 118 aa12.62□□□□□ -0.39
PACS1-215ENST00000534273 KCNIP4Q6PIL6 250 aa12.62□□□□□ -0.39
PACS1-215ENST00000534273 CLRN3Q8NCR9 226 aa12.62□□□□□ -0.39
PACS1-215ENST00000534273 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
PACS1-215ENST00000534273 OSTCQ9NRP0 149 aa12.62□□□□□ -0.39
PACS1-215ENST00000534273 HSPG2P98160 4391 aa12.62□□□□□ -0.39
PACS1-215ENST00000534273 PNRC1Q12796 327 aaPredicted RBP12.61□□□□□ -0.39
PACS1-215ENST00000534273 CHCHD5Q9BSY4 110 aa12.61□□□□□ -0.39
PACS1-215ENST00000534273 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
PACS1-215ENST00000534273 TMEM241Q24JQ0 296 aa12.6□□□□□ -0.39
PACS1-215ENST00000534273 TSKUQ8WUA8 353 aa12.6□□□□□ -0.39
PACS1-215ENST00000534273 UBE2WQ96B02 151 aa12.6□□□□□ -0.39
PACS1-215ENST00000534273 NAT8Q9UHE5 227 aa12.6□□□□□ -0.39
PACS1-215ENST00000534273 APOBP04114 4563 aaKnown RBP12.59□□□□□ -0.39
PACS1-215ENST00000534273 PKIAP61925 76 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 MPV17L2Q567V2 206 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 MAPKAPK5-AS1Q8N8E1 139 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 RMI2Q96E14 147 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
PACS1-215ENST00000534273 TRBV25-1A0A075B6N4 114 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 WFDC2Q14508 124 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 RHEBQ15382 184 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 Q8N814 137 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 ISOC2Q96AB3 205 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 COX11Q9Y6N1 276 aa12.58□□□□□ -0.4
PACS1-215ENST00000534273 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
PACS1-215ENST00000534273 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
PACS1-215ENST00000534273 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
PACS1-215ENST00000534273 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
PACS1-215ENST00000534273 KRTAP10-1P60331 282 aa12.57□□□□□ -0.4
PACS1-215ENST00000534273 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
PACS1-215ENST00000534273 C15orf54Q8N8G6 183 aa12.57□□□□□ -0.4
PACS1-215ENST00000534273 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
PACS1-215ENST00000534273 FRZBQ92765 325 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms