RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	TSPO	P30536	169 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	NDUFA6	P56556	154 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	DEFB131A	P59861	70 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910		Q0VG73	95 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	TDRG1	Q3Y452	100 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	GFI1B	Q5VTD9	330 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	LYZL1	Q6UWQ5	148 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	HIST3H2BB	Q8N257	126 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	BORCS7	Q96B45	105 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	SCRT2	Q9NQ03	307 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	TP53TG3	Q9ULZ0	132 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	SORL1	Q92673	2214 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	JMJD1C	Q15652	2540 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	MAST4	O15021	2626 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	GRIFIN	A4D1Z8	144 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	KNCN	A6PVL3	124 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910		G3V4G9	280 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	DLEU1	O43261	78 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF324	O75467	553 aa	Predicted RBP	4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	ATP5L	O75964	103 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	NXPH4	O95158	308 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	ESD	P10768	282 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	SRI	P30626	198 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	RNASE4	P34096	147 aa	Known RBP	4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	CACNG7	P62955	275 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	SPINK13	Q1W4C9	94 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	OR10J3	Q5JRS4	329 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	VWF	P04275	2813 aa		4.16	□□□□□ -1.74
CHKA-208	ENST00000533910	MUC4	Q99102	2169 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910		H3BVH4	76 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910		M0R2Z0	102 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	ASIP	P42127	132 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	CMC4	P56277	68 aa	Predicted RBP	4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	KIAA1644	Q3SXP7	199 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	TMEM97	Q5BJF2	176 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	FAM104B	Q5XKR9	115 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	TRPT1	Q86TN4	253 aa	Known RBP	4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	OR10AG1	Q8NH19	301 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	C18orf32	Q8TCD1	76 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	KCNS1	Q96KK3	526 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	HIST1H2BL	Q99880	126 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	TMEM191A	Q9H0A3	160 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910		U3KQK5	164 aa		4.15	□□□□□ -1.75
CHKA-208	ENST00000533910	TRAV12-2	A0A075B6T6	113 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	IGHV1OR15-1	A0A075B7D0	117 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	TRAV12-3	A0A0B4J271	114 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	SERF1A	O75920	110 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	IGKV3-20	P01619	116 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	AMBP	P02760	352 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	RBMY1A1	P0DJD3	496 aa	Known RBP	4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	RBMY1C	P0DJD4	496 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	RNASE3	P12724	160 aa	Known RBP	4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	NTF3	P20783	257 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	INSL3	P51460	131 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	RBMY1F	Q15415	496 aa	Known RBP	4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	KRTAP24-1	Q3LI83	254 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	MUC21	Q5SSG8	566 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	TMEM256	Q8N2U0	113 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	C9orf85	Q96MD7	179 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	RCHY1	Q96PM5	261 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	C20orf144	Q9BQM9	153 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	LINC00467	Q9BRT7	94 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	TMEM208	Q9BTX3	173 aa		4.14	□□□□□ -1.75
CHKA-208	ENST00000533910	IGHV3-16	A0A0C4DH30	117 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	MUC21	A0A0G2JKD1	596 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	MUC21	A0A140T8X8	626 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	TINCR	A0A1B0GVN0	87 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	GNRH2	O43555	120 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	NUPR1	O60356	82 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	INS	P01308	110 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	S100A4	P26447	101 aa	Known RBP	4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	S100A2	P29034	98 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	AKR1D1	P51857	326 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	RPL24	P83731	157 aa	Known RBP	4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	CD164	Q04900	197 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	MRPL51	Q4U2R6	128 aa	Known RBP	4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	C9orf66	Q5T8R8	295 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	BAGE3	Q86Y29	109 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	AMN1	Q8IY45	258 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	RNF185	Q96GF1	192 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910	RETN	Q9HD89	108 aa		4.13	□□□□□ -1.75
CHKA-208	ENST00000533910		D6R8Y8	96 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	CD7	P09564	240 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	FABP4	P15090	132 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	TCTA	P57738	103 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	IQCJ	Q1A5X6	159 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	SPANXN1	Q5VSR9	72 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	FAM19A1	Q7Z5A9	133 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	ORMDL3	Q8N138	153 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	DEFB125	Q8N687	156 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	POM121L12	Q8N7R1	296 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	WFDC9	Q8NEX5	89 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	SPATA3	Q8NHX4	192 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	CHCHD1	Q96BP2	118 aa	Known RBP	4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	AP1S3	Q96PC3	154 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	SPANXC	Q9NY87	97 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	TP53TG1	Q9Y2A0	90 aa		4.12	□□□□□ -1.75
CHKA-208	ENST00000533910	LAMTOR2	Q9Y2Q5	125 aa		4.12	□□□□□ -1.75

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