RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
NUP98-220ENST00000533346 A8MWL6 223 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 H7C1H1 209 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 ERVFC1-1P60608 527 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 ZNF56Q15929 161 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 LINC01551Q86U37 167 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 NIT1Q86X76 327 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 GFRA4Q9GZZ7 299 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 RNASE7Q9H1E1 156 aaKnown RBP6.6□□□□□ -1.35
NUP98-220ENST00000533346 DPH3P1Q9H4G8 78 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 OSTCQ9NRP0 149 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 TNFRSF18Q9Y5U5 241 aa6.6□□□□□ -1.35
NUP98-220ENST00000533346 A0A087WTM6 91 aa6.59□□□□□ -1.35
NUP98-220ENST00000533346 TRBV6-8A0A0A6YYG3 113 aa6.59□□□□□ -1.35
NUP98-220ENST00000533346 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
NUP98-220ENST00000533346 ZNF727A8MUV8 499 aa6.59□□□□□ -1.35
NUP98-220ENST00000533346 GATCO43716 136 aaKnown RBP6.59□□□□□ -1.35
NUP98-220ENST00000533346 CDK2AP2O75956 126 aa6.59□□□□□ -1.35
NUP98-220ENST00000533346 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.59□□□□□ -1.35
NUP98-220ENST00000533346 SMIM7Q9BQ49 75 aa6.59□□□□□ -1.35
NUP98-220ENST00000533346 TRAV8-3A0A0A6YYJ7 113 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 MUC21A0A0G2JKD1 596 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 MUC21A0A140T8X8 626 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 EREGO14944 169 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 PKIAP61925 76 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 ELOBQ15370 118 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 ATRAIDQ6UW56 229 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 SPATA12Q7Z6I5 190 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
NUP98-220ENST00000533346 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
NUP98-220ENST00000533346 C16orf90A8MZG2 172 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 F5H697 171 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 IGHV3-30P01768 117 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 IGHV3-33P01772 117 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 IGHV3-30-3P0DP02 117 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 IGHV3-30-5P0DP03 117 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 PEA15Q15121 130 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 IQCJQ1A5X6 159 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 NTM-AS1Q6ZSK4 140 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 TSKUQ8WUA8 353 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 PGLYRP4Q96LB8 373 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 TM2D2Q9BX73 214 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 NIT2Q9NQR4 276 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 HSPG2P98160 4391 aa6.57□□□□□ -1.36
NUP98-220ENST00000533346 TWIST1Q15672 202 aa6.56□□□□□ -1.36
NUP98-220ENST00000533346 TMEM241Q24JQ0 296 aa6.56□□□□□ -1.36
NUP98-220ENST00000533346 ISOC2Q96AB3 205 aa6.56□□□□□ -1.36
NUP98-220ENST00000533346 URGCP-MRPS24S4R325 110 aa6.56□□□□□ -1.36
NUP98-220ENST00000533346 HERC1Q15751 4861 aa6.56□□□□□ -1.36
NUP98-220ENST00000533346 C9JQL5 133 aa6.55□□□□□ -1.36
NUP98-220ENST00000533346 RPL23P62829 140 aaKnown RBP6.55□□□□□ -1.36
NUP98-220ENST00000533346 Q0VG73 95 aa6.55□□□□□ -1.36
NUP98-220ENST00000533346 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
NUP98-220ENST00000533346 NAT8Q9UHE5 227 aa6.55□□□□□ -1.36
NUP98-220ENST00000533346 V9GYV3 84 aa6.55□□□□□ -1.36
NUP98-220ENST00000533346 TRBV25-1A0A075B6N4 114 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 A0A087WX48 190 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 TRBV6-5A0A0K0K1A5 114 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 A0A1B0GUV1 79 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 SSTP61278 116 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 SRSF3P84103 164 aaKnown RBP6.54□□□□□ -1.36
NUP98-220ENST00000533346 KCNIP4Q6PIL6 250 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 SMIM15Q7Z3B0 74 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 Q8N3U1 123 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 C15orf54Q8N8G6 183 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 GATD1Q8NB37 220 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 RMI2Q96E14 147 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 PRR34Q9NV39 138 aa6.54□□□□□ -1.36
NUP98-220ENST00000533346 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 IGHV1-24A0A0C4DH33 117 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 A0A1B0GUT8 65 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 HIGD1CA8MV81 97 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 PSCAO43653 123 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 MGPP08493 103 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 CEBPGP53567 150 aa6.53□□□□□ -1.36
NUP98-220ENST00000533346 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 NCR2O95944 276 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 MPV17L2Q567V2 206 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 ENHOQ6UWT2 76 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 Q8N814 137 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 NUP35Q8NFH5 326 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 BORCS7Q96B45 105 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 KLK12Q9UKR0 248 aa6.52□□□□□ -1.37
NUP98-220ENST00000533346 TMEM262E9PQX1 116 aa6.51□□□□□ -1.37
NUP98-220ENST00000533346 H7C423 109 aa6.51□□□□□ -1.37
NUP98-220ENST00000533346 MIAQ16674 131 aa6.51□□□□□ -1.37
NUP98-220ENST00000533346 CLLU1Q5K131 121 aa6.51□□□□□ -1.37
NUP98-220ENST00000533346 CHCHD5Q9BSY4 110 aa6.51□□□□□ -1.37
NUP98-220ENST00000533346 Q9HAA7 133 aa6.51□□□□□ -1.37
NUP98-220ENST00000533346 A0A1B0GW15 77 aa6.5□□□□□ -1.37
NUP98-220ENST00000533346 RAB4AP20338 218 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms