RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MGPP08493 103 aa13.79□□□□□ -0.2
CCS-208ENST00000533244 RPL23P62829 140 aaKnown RBP13.79□□□□□ -0.2
CCS-208ENST00000533244 SUMO4Q6EEV6 95 aa13.79□□□□□ -0.2
CCS-208ENST00000533244 ISOC2Q96AB3 205 aa13.79□□□□□ -0.2
CCS-208ENST00000533244 IBA57-AS1B1ANH7 110 aa13.78□□□□□ -0.2
CCS-208ENST00000533244 TWIST1Q15672 202 aa13.78□□□□□ -0.2
CCS-208ENST00000533244 NAT8Q9UHE5 227 aa13.78□□□□□ -0.2
CCS-208ENST00000533244 FAM231BA6NCW3 169 aa13.77□□□□□ -0.21
CCS-208ENST00000533244 TSKUQ8WUA8 353 aa13.77□□□□□ -0.21
CCS-208ENST00000533244 GFRA4Q9GZZ7 299 aa13.77□□□□□ -0.21
CCS-208ENST00000533244 V9GYV3 84 aa13.77□□□□□ -0.21
CCS-208ENST00000533244 H7C1H1 209 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 IGHV3-30P01768 117 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 IGHV3-33P01772 117 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 IGHV3-30-5P0DP03 117 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 Q8N3U1 123 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 DNAJC30Q96LL9 226 aa13.76□□□□□ -0.21
CCS-208ENST00000533244 NIT1Q86X76 327 aa13.75□□□□□ -0.21
CCS-208ENST00000533244 PGLYRP4Q96LB8 373 aa13.75□□□□□ -0.21
CCS-208ENST00000533244 TRBV6-8A0A0A6YYG3 113 aa13.74□□□□□ -0.21
CCS-208ENST00000533244 RAB14P61106 215 aa13.74□□□□□ -0.21
CCS-208ENST00000533244 LAGE3Q14657 143 aa13.74□□□□□ -0.21
CCS-208ENST00000533244 DAZ4Q86SG3 579 aaKnown RBP13.74□□□□□ -0.21
CCS-208ENST00000533244 C15orf54Q8N8G6 183 aa13.74□□□□□ -0.21
CCS-208ENST00000533244 DAZ3Q9NR90 486 aaKnown RBP13.74□□□□□ -0.21
CCS-208ENST00000533244 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
CCS-208ENST00000533244 ADIRFQ15847 76 aa13.73□□□□□ -0.21
CCS-208ENST00000533244 RASL11AQ6T310 242 aa13.73□□□□□ -0.21
CCS-208ENST00000533244 CLLU1Q5K131 121 aa13.73□□□□□ -0.21
CCS-208ENST00000533244 CHCHD7Q9BUK0 85 aa13.73□□□□□ -0.21
CCS-208ENST00000533244 IFITM2Q01629 132 aa13.72□□□□□ -0.21
CCS-208ENST00000533244 TMEM97Q5BJF2 176 aa13.72□□□□□ -0.21
CCS-208ENST00000533244 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
CCS-208ENST00000533244 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.72□□□□□ -0.21
CCS-208ENST00000533244 NIT2Q9NQR4 276 aa13.71□□□□□ -0.22
CCS-208ENST00000533244 KIAA1109Q2LD37 5005 aa13.7□□□□□ -0.22
CCS-208ENST00000533244 A0A1B0GUT8 65 aa13.7□□□□□ -0.22
CCS-208ENST00000533244 SMIM15Q7Z3B0 74 aa13.7□□□□□ -0.22
CCS-208ENST00000533244 GATD1Q8NB37 220 aa13.7□□□□□ -0.22
CCS-208ENST00000533244 FRZBQ92765 325 aa13.7□□□□□ -0.22
CCS-208ENST00000533244 BORCS7Q96B45 105 aa13.7□□□□□ -0.22
CCS-208ENST00000533244 SPATA12Q7Z6I5 190 aa13.68□□□□□ -0.22
CCS-208ENST00000533244 NUP35Q8NFH5 326 aa13.68□□□□□ -0.22
CCS-208ENST00000533244 Q9HAA7 133 aa13.68□□□□□ -0.22
CCS-208ENST00000533244 URGCP-MRPS24S4R325 110 aa13.68□□□□□ -0.22
CCS-208ENST00000533244 DNAH5Q8TE73 4624 aa13.68□□□□□ -0.22
CCS-208ENST00000533244 LRP1BQ9NZR2 4599 aa13.67□□□□□ -0.22
CCS-208ENST00000533244 A0A087WTM6 91 aa13.67□□□□□ -0.22
CCS-208ENST00000533244 TRAV26-2A0A0B4J265 109 aa13.67□□□□□ -0.22
CCS-208ENST00000533244 KRTAP10-2P60368 255 aa13.67□□□□□ -0.22
CCS-208ENST00000533244 IQCJQ1A5X6 159 aa13.67□□□□□ -0.22
CCS-208ENST00000533244 A0A087WX48 190 aa13.66□□□□□ -0.22
CCS-208ENST00000533244 SMIM27A0A1W2PRY6 76 aa13.66□□□□□ -0.22
CCS-208ENST00000533244 TMEM191AQ9H0A3 160 aa13.66□□□□□ -0.22
CCS-208ENST00000533244 NAT8BQ9UHF3 227 aa13.66□□□□□ -0.22
CCS-208ENST00000533244 HERC2O95714 4834 aa13.66□□□□□ -0.22
CCS-208ENST00000533244 TRAV8-3A0A0A6YYJ7 113 aa13.65□□□□□ -0.22
CCS-208ENST00000533244 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 PKIAP61925 76 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 C16orf90A8MZG2 172 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 ELOBQ15370 118 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 MPV17L2Q567V2 206 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 KCNIP4Q6PIL6 250 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 RPL39LQ96EH5 51 aaKnown RBP13.64□□□□□ -0.23
CCS-208ENST00000533244 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 CHCHD5Q9BSY4 110 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
CCS-208ENST00000533244 IGHV1-24A0A0C4DH33 117 aa13.63□□□□□ -0.23
CCS-208ENST00000533244 EREGO14944 169 aa13.63□□□□□ -0.23
CCS-208ENST00000533244 RIGQ13278 110 aa13.63□□□□□ -0.23
CCS-208ENST00000533244 TM2D2Q9BX73 214 aa13.63□□□□□ -0.23
CCS-208ENST00000533244 TMEM262E9PQX1 116 aa13.62□□□□□ -0.23
CCS-208ENST00000533244 PSCAO43653 123 aa13.62□□□□□ -0.23
CCS-208ENST00000533244 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
CCS-208ENST00000533244 RAB4AP20338 218 aa13.61□□□□□ -0.23
CCS-208ENST00000533244 PNRC1Q12796 327 aaPredicted RBP13.61□□□□□ -0.23
CCS-208ENST00000533244 ATRAIDQ6UW56 229 aa13.61□□□□□ -0.23
CCS-208ENST00000533244 GAS8-AS1O95177 125 aa13.6□□□□□ -0.23
CCS-208ENST00000533244 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
CCS-208ENST00000533244 COTL1Q14019 142 aa13.59□□□□□ -0.23
CCS-208ENST00000533244 AMN1Q8IY45 258 aa13.59□□□□□ -0.23
CCS-208ENST00000533244 Q8N976 141 aa13.59□□□□□ -0.23
CCS-208ENST00000533244 RBX1P62877 108 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 GAGE6Q13070 117 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 CDPF1Q6NVV7 123 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 UQCC3Q6UW78 93 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 UBE2WQ96B02 151 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 MRAP2Q96G30 205 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 TMEM243Q9BU79 118 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 COX11Q9Y6N1 276 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 RYR1P21817 5038 aa13.58□□□□□ -0.24
CCS-208ENST00000533244 A0A1B0GW15 77 aa13.57□□□□□ -0.24
CCS-208ENST00000533244 SDHAF1A6NFY7 115 aa13.57□□□□□ -0.24
CCS-208ENST00000533244 PPP1R2P9O14990 202 aa13.57□□□□□ -0.24
CCS-208ENST00000533244 Q0VG73 95 aa13.57□□□□□ -0.24
CCS-208ENST00000533244 MAPKAPK5-AS1Q8N8E1 139 aa13.57□□□□□ -0.24
CCS-208ENST00000533244 RMI2Q96E14 147 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms