RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 VAX2Q9UIW0 290 aa8.12□□□□□ -1.11
SDHD-213ENST00000532699 A0A087WX48 190 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 S100A9P06702 114 aaKnown RBP8.11□□□□□ -1.11
SDHD-213ENST00000532699 IGLC6P0CF74 106 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 SSTP61278 116 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 ZNF56Q15929 161 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 COX11Q9Y6N1 276 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
SDHD-213ENST00000532699 TRBV20OR9-2A0A075B6H5 130 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 A0A0D9SG52 128 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 RAB19A4D1S5 217 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
SDHD-213ENST00000532699 PANO1I0J062 215 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 RMI2Q96E14 147 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 PRR34Q9NV39 138 aa8.1□□□□□ -1.11
SDHD-213ENST00000532699 TMEM262E9PQX1 116 aa8.09□□□□□ -1.11
SDHD-213ENST00000532699 PRSS1P07477 247 aa8.09□□□□□ -1.11
SDHD-213ENST00000532699 TRAV1-1A0A0B4J248 108 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 M0QY20 66 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
SDHD-213ENST00000532699 HNRNPA3P51991 378 aaKnown RBP8.08□□□□□ -1.12
SDHD-213ENST00000532699 RBX1P62877 108 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 Q0VG73 95 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 CENPWQ5EE01 88 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 SPANXN1Q5VSR9 72 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 CLPSL2Q6UWE3 100 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 GNG13Q9P2W3 67 aa8.08□□□□□ -1.12
SDHD-213ENST00000532699 PFDN1O60925 122 aa8.07□□□□□ -1.12
SDHD-213ENST00000532699 ANGP03950 147 aaKnown RBP8.07□□□□□ -1.12
SDHD-213ENST00000532699 GAGE6Q13070 117 aa8.07□□□□□ -1.12
SDHD-213ENST00000532699 ELOBQ15370 118 aa8.07□□□□□ -1.12
SDHD-213ENST00000532699 SUMO4Q6EEV6 95 aa8.07□□□□□ -1.12
SDHD-213ENST00000532699 CHCHD5Q9BSY4 110 aa8.07□□□□□ -1.12
SDHD-213ENST00000532699 C1orf43Q9BWL3 253 aa8.07□□□□□ -1.12
SDHD-213ENST00000532699 F5H697 171 aa8.06□□□□□ -1.12
SDHD-213ENST00000532699 IQCJQ1A5X6 159 aa8.06□□□□□ -1.12
SDHD-213ENST00000532699 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
SDHD-213ENST00000532699 C20orf203Q8NBC4 194 aa8.06□□□□□ -1.12
SDHD-213ENST00000532699 DEFB104AQ8WTQ1 72 aa8.06□□□□□ -1.12
SDHD-213ENST00000532699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.06□□□□□ -1.12
SDHD-213ENST00000532699 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 J3QL48 77 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 SLPIP03973 132 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 MIAQ16674 131 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 OR2D3Q8NGH3 330 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 MANBALQ9NQG1 85 aa8.05□□□□□ -1.12
SDHD-213ENST00000532699 SULT1A2P50226 295 aa8.04□□□□□ -1.12
SDHD-213ENST00000532699 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
SDHD-213ENST00000532699 DAZAP1Q96EP5 407 aaKnown RBP8.04□□□□□ -1.12
SDHD-213ENST00000532699 CRPP02741 224 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 MGPP08493 103 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 NKX2-5P52952 324 aaPredicted RBP8.03□□□□□ -1.12
SDHD-213ENST00000532699 KCNIP4Q6PIL6 250 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 LYZL1Q6UWQ5 148 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 TPPP3Q9BW30 176 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
SDHD-213ENST00000532699 IGLV10-54A0A075B6I4 117 aa8.02□□□□□ -1.13
SDHD-213ENST00000532699 TRBV25-1A0A075B6N4 114 aa8.02□□□□□ -1.13
SDHD-213ENST00000532699 K7EN84 100 aa8.02□□□□□ -1.13
SDHD-213ENST00000532699 MEF2BQ02080 365 aaPredicted RBP8.02□□□□□ -1.13
SDHD-213ENST00000532699 SDIM1Q6ZPB5 146 aa8.02□□□□□ -1.13
SDHD-213ENST00000532699 IGHV1-24A0A0C4DH33 117 aa8.01□□□□□ -1.13
SDHD-213ENST00000532699 NTF3P20783 257 aa8.01□□□□□ -1.13
SDHD-213ENST00000532699 EIF5AP63241 154 aaKnown RBP8.01□□□□□ -1.13
SDHD-213ENST00000532699 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
SDHD-213ENST00000532699 TMEM97Q5BJF2 176 aa8.01□□□□□ -1.13
SDHD-213ENST00000532699 NUDT10Q8NFP7 164 aa8.01□□□□□ -1.13
SDHD-213ENST00000532699 NUDT11Q96G61 164 aa8.01□□□□□ -1.13
SDHD-213ENST00000532699 SMIM17P0DL12 118 aa8□□□□□ -1.13
SDHD-213ENST00000532699 BCL2P10415 239 aa8□□□□□ -1.13
SDHD-213ENST00000532699 CTRLP40313 264 aa8□□□□□ -1.13
SDHD-213ENST00000532699 GNG4P50150 75 aa8□□□□□ -1.13
SDHD-213ENST00000532699 RAB5CP51148 216 aa8□□□□□ -1.13
SDHD-213ENST00000532699 FOXA3P55318 350 aaPredicted RBP8□□□□□ -1.13
SDHD-213ENST00000532699 RPS20P60866 119 aaKnown RBP8□□□□□ -1.13
SDHD-213ENST00000532699 CACNG7P62955 275 aa8□□□□□ -1.13
SDHD-213ENST00000532699 REG3AQ06141 175 aa8□□□□□ -1.13
SDHD-213ENST00000532699 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
SDHD-213ENST00000532699 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
SDHD-213ENST00000532699 RASL11AQ6T310 242 aa8□□□□□ -1.13
SDHD-213ENST00000532699 C9orf62Q8N4C0 152 aa8□□□□□ -1.13
SDHD-213ENST00000532699 SMIM12Q96EX1 92 aa8□□□□□ -1.13
SDHD-213ENST00000532699 CNFNQ9BYD5 112 aa8□□□□□ -1.13
SDHD-213ENST00000532699 TRAV26-2A0A0B4J265 109 aa7.99□□□□□ -1.13
SDHD-213ENST00000532699 A0A1B0GUV1 79 aa7.99□□□□□ -1.13
SDHD-213ENST00000532699 P01737 135 aa7.99□□□□□ -1.13
SDHD-213ENST00000532699 TCTE3Q8IZS6 198 aa7.99□□□□□ -1.13
SDHD-213ENST00000532699 GATD1Q8NB37 220 aa7.99□□□□□ -1.13
SDHD-213ENST00000532699 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
SDHD-213ENST00000532699 GTSF1Q8WW33 167 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms