RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
UBXN1-211ENST00000531056 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
UBXN1-211ENST00000531056 AP1S3Q96PC3 154 aa12.75□□□□□ -0.37
UBXN1-211ENST00000531056 A0A087WTM6 91 aa12.74□□□□□ -0.37
UBXN1-211ENST00000531056 GATCO43716 136 aaKnown RBP12.74□□□□□ -0.37
UBXN1-211ENST00000531056 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
UBXN1-211ENST00000531056 DNAH5Q8TE73 4624 aa12.73□□□□□ -0.37
UBXN1-211ENST00000531056 CACNG7P62955 275 aa12.73□□□□□ -0.37
UBXN1-211ENST00000531056 LAGE3Q14657 143 aa12.73□□□□□ -0.37
UBXN1-211ENST00000531056 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
UBXN1-211ENST00000531056 ISOC2Q96AB3 205 aa12.73□□□□□ -0.37
UBXN1-211ENST00000531056 OSTCQ9NRP0 149 aa12.73□□□□□ -0.37
UBXN1-211ENST00000531056 TMEM218A2RU14 115 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 F2Z2F3 143 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 EREGO14944 169 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 CTRLP40313 264 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-211ENST00000531056 CT83Q5H943 113 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 Q9HAA7 133 aa12.71□□□□□ -0.37
UBXN1-211ENST00000531056 RYR1P21817 5038 aa12.7□□□□□ -0.38
UBXN1-211ENST00000531056 A8MWL6 223 aa12.7□□□□□ -0.38
UBXN1-211ENST00000531056 F5H697 171 aa12.7□□□□□ -0.38
UBXN1-211ENST00000531056 F8W036 122 aa12.7□□□□□ -0.38
UBXN1-211ENST00000531056 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
UBXN1-211ENST00000531056 DAZ4Q86SG3 579 aaKnown RBP12.7□□□□□ -0.38
UBXN1-211ENST00000531056 NIT1Q86X76 327 aa12.7□□□□□ -0.38
UBXN1-211ENST00000531056 DAZ3Q9NR90 486 aaKnown RBP12.7□□□□□ -0.38
UBXN1-211ENST00000531056 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
UBXN1-211ENST00000531056 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
UBXN1-211ENST00000531056 FUSP35637 526 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBXN1-211ENST00000531056 CDPF1Q6NVV7 123 aa12.68□□□□□ -0.38
UBXN1-211ENST00000531056 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
UBXN1-211ENST00000531056 PGPEP1Q9NXJ5 209 aa12.68□□□□□ -0.38
UBXN1-211ENST00000531056 HSPG2P98160 4391 aa12.67□□□□□ -0.38
UBXN1-211ENST00000531056 PSCAO43653 123 aa12.67□□□□□ -0.38
UBXN1-211ENST00000531056 MGPP08493 103 aa12.67□□□□□ -0.38
UBXN1-211ENST00000531056 NTF3P20783 257 aa12.67□□□□□ -0.38
UBXN1-211ENST00000531056 SEC11CQ9BY50 192 aa12.67□□□□□ -0.38
UBXN1-211ENST00000531056 TRBV6-8A0A0A6YYG3 113 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 M0QY20 66 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 TRGC1P0CF51 173 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 SUMO4Q6EEV6 95 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 TSKUQ8WUA8 353 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 V9GYV3 84 aa12.66□□□□□ -0.38
UBXN1-211ENST00000531056 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
UBXN1-211ENST00000531056 GTSF1Q8WW33 167 aa12.65□□□□□ -0.38
UBXN1-211ENST00000531056 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
UBXN1-211ENST00000531056 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
UBXN1-211ENST00000531056 URGCP-MRPS24S4R325 110 aa12.65□□□□□ -0.38
UBXN1-211ENST00000531056 APOBP04114 4563 aaKnown RBP12.65□□□□□ -0.38
UBXN1-211ENST00000531056 FAM231BA6NCW3 169 aa12.64□□□□□ -0.39
UBXN1-211ENST00000531056 PPP1R2P9O14990 202 aa12.64□□□□□ -0.39
UBXN1-211ENST00000531056 H7C1H1 209 aa12.63□□□□□ -0.39
UBXN1-211ENST00000531056 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
UBXN1-211ENST00000531056 NTM-AS1Q6ZSK4 140 aa12.63□□□□□ -0.39
UBXN1-211ENST00000531056 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.63□□□□□ -0.39
UBXN1-211ENST00000531056 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
UBXN1-211ENST00000531056 DNAJC30Q96LL9 226 aa12.63□□□□□ -0.39
UBXN1-211ENST00000531056 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
UBXN1-211ENST00000531056 KRTAP17-1Q9BYP8 105 aa12.63□□□□□ -0.39
UBXN1-211ENST00000531056 A0A087WX48 190 aa12.62□□□□□ -0.39
UBXN1-211ENST00000531056 MT-ND4LP03901 98 aa12.62□□□□□ -0.39
UBXN1-211ENST00000531056 TWIST1Q15672 202 aa12.62□□□□□ -0.39
UBXN1-211ENST00000531056 KLK12Q9UKR0 248 aa12.62□□□□□ -0.39
UBXN1-211ENST00000531056 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
UBXN1-211ENST00000531056 TMEM97Q5BJF2 176 aa12.61□□□□□ -0.39
UBXN1-211ENST00000531056 C10orf91Q5T1B1 145 aa12.61□□□□□ -0.39
UBXN1-211ENST00000531056 RASL11AQ6T310 242 aa12.61□□□□□ -0.39
UBXN1-211ENST00000531056 ANAPC16Q96DE5 110 aa12.61□□□□□ -0.39
UBXN1-211ENST00000531056 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
UBXN1-211ENST00000531056 WFDC2Q14508 124 aa12.6□□□□□ -0.39
UBXN1-211ENST00000531056 MPV17L2Q567V2 206 aa12.6□□□□□ -0.39
UBXN1-211ENST00000531056 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
UBXN1-211ENST00000531056 Q8N814 137 aa12.6□□□□□ -0.39
UBXN1-211ENST00000531056 NAT8BQ9UHF3 227 aa12.6□□□□□ -0.39
UBXN1-211ENST00000531056 CARHSP1Q9Y2V2 147 aaKnown RBP12.6□□□□□ -0.39
UBXN1-211ENST00000531056 ELOBQ15370 118 aa12.59□□□□□ -0.39
UBXN1-211ENST00000531056 NDUFA5Q16718 116 aa12.59□□□□□ -0.39
UBXN1-211ENST00000531056 MAPKAPK5-AS1Q8N8E1 139 aa12.59□□□□□ -0.39
UBXN1-211ENST00000531056 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
UBXN1-211ENST00000531056 CHCHD5Q9BSY4 110 aa12.59□□□□□ -0.39
UBXN1-211ENST00000531056 SMIM27A0A1W2PRY6 76 aa12.58□□□□□ -0.4
UBXN1-211ENST00000531056 TMEM262E9PQX1 116 aa12.58□□□□□ -0.4
UBXN1-211ENST00000531056 KRTAP10-1P60331 282 aa12.58□□□□□ -0.4
UBXN1-211ENST00000531056 ATRAIDQ6UW56 229 aa12.58□□□□□ -0.4
UBXN1-211ENST00000531056 UBE2WQ96B02 151 aa12.58□□□□□ -0.4
UBXN1-211ENST00000531056 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
UBXN1-211ENST00000531056 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 PKIAP61925 76 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 IQCJQ1A5X6 159 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 NUP35Q8NFH5 326 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 RMI2Q96E14 147 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 KRTAP4-5Q9BYR2 181 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 COX11Q9Y6N1 276 aa12.57□□□□□ -0.4
UBXN1-211ENST00000531056 SMIM15Q7Z3B0 74 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms